RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 GPAT2Q6NUI2 795 aa22.9■■□□□ 1.26
USP11-205ENST00000467378 PXYLP1Q8TE99 480 aa22.9■■□□□ 1.26
USP11-205ENST00000467378 DHX36Q9H2U1 1008 aaKnown RBP22.9■■□□□ 1.26
USP11-205ENST00000467378 DCP1AQ9NPI6 582 aaPredicted RBP22.9■■□□□ 1.26
USP11-205ENST00000467378 ATP8A2Q9NTI2 1148 aa22.9■■□□□ 1.26
USP11-205ENST00000467378 ZNF112Q9UJU3 913 aa22.9■■□□□ 1.26
USP11-205ENST00000467378 PALD1Q9ULE6 856 aa22.9■■□□□ 1.26
USP11-205ENST00000467378 PTPRFP10586 1907 aa22.9■■□□□ 1.26
USP11-205ENST00000467378 LAMA3Q16787 3333 aa22.89■■□□□ 1.26
USP11-205ENST00000467378 HIP1O00291 1037 aa22.89■■□□□ 1.25
USP11-205ENST00000467378 TNPO2O14787 897 aaKnown RBP22.89■■□□□ 1.25
USP11-205ENST00000467378 MCMDC2Q4G0Z9 681 aa22.89■■□□□ 1.25
USP11-205ENST00000467378 DIS3LQ8TF46 1054 aaKnown RBP22.89■■□□□ 1.25
USP11-205ENST00000467378 COL25A1Q9BXS0 654 aaPredicted RBP22.89■■□□□ 1.25
USP11-205ENST00000467378 SAP30BPQ9UHR5 308 aaKnown RBP22.89■■□□□ 1.25
USP11-205ENST00000467378 GSG1L2A8MUP6 293 aa22.88■■□□□ 1.25
USP11-205ENST00000467378 CXCL11O14625 94 aa22.88■■□□□ 1.25
USP11-205ENST00000467378 SLURP2P0DP57 97 aa22.88■■□□□ 1.25
USP11-205ENST00000467378 BMP2KLQ5H9B9 411 aa22.88■■□□□ 1.25
USP11-205ENST00000467378 CCDC129Q6ZRS4 1044 aa22.88■■□□□ 1.25
USP11-205ENST00000467378 CRISPLD2Q9H0B8 497 aa22.88■■□□□ 1.25
USP11-205ENST00000467378 PAK6Q9NQU5 681 aaPredicted RBP22.88■■□□□ 1.25
USP11-205ENST00000467378 MTMR10Q9NXD2 777 aa22.88■■□□□ 1.25
USP11-205ENST00000467378 TBC1D12O60347 775 aa22.87■■□□□ 1.25
USP11-205ENST00000467378 GNAT2P19087 354 aa22.87■■□□□ 1.25
USP11-205ENST00000467378 IRF5Q13568 498 aa22.87■■□□□ 1.25
USP11-205ENST00000467378 NOL9Q5SY16 702 aaKnown RBP22.87■■□□□ 1.25
USP11-205ENST00000467378 DIAPH3Q9NSV4 1193 aa22.87■■□□□ 1.25
USP11-205ENST00000467378 PI4KBQ9UBF8 816 aa22.87■■□□□ 1.25
USP11-205ENST00000467378 PATL2C9JE40 543 aaKnown RBP22.86■■□□□ 1.25
USP11-205ENST00000467378 CHMLP26374 656 aa22.86■■□□□ 1.25
USP11-205ENST00000467378 CWC27Q6UX04 472 aaKnown RBP22.86■■□□□ 1.25
USP11-205ENST00000467378 GADL1Q6ZQY3 521 aa22.86■■□□□ 1.25
USP11-205ENST00000467378 METTL16Q86W50 562 aaKnown RBP22.86■■□□□ 1.25
USP11-205ENST00000467378 FOXP4Q8IVH2 680 aaPredicted RBP22.86■■□□□ 1.25
USP11-205ENST00000467378 MCM9Q9NXL9 1143 aa22.86■■□□□ 1.25
USP11-205ENST00000467378 SYN1P17600 705 aa22.85■■□□□ 1.25
USP11-205ENST00000467378 LRIT3Q3SXY7 679 aa22.85■■□□□ 1.25
USP11-205ENST00000467378 GIMAP6Q6P9H5 292 aa22.85■■□□□ 1.25
USP11-205ENST00000467378 FASTKD5Q7L8L6 764 aaKnown RBP22.85■■□□□ 1.25
USP11-205ENST00000467378 ZNF589Q86UQ0 364 aaPredicted RBP22.85■■□□□ 1.25
USP11-205ENST00000467378 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.85■■□□□ 1.25
USP11-205ENST00000467378 FOXP2O15409 715 aa22.84■■□□□ 1.25
USP11-205ENST00000467378 POLR3DP05423 398 aaPredicted RBP22.84■■□□□ 1.25
USP11-205ENST00000467378 HLA-DOAP06340 250 aa22.84■■□□□ 1.25
USP11-205ENST00000467378 PLCD1P51178 756 aa22.84■■□□□ 1.25
USP11-205ENST00000467378 TTC6Q86TZ1 520 aa22.84■■□□□ 1.25
USP11-205ENST00000467378 IFNL3Q8IZI9 196 aa22.84■■□□□ 1.25
USP11-205ENST00000467378 TDHQ8IZJ6 230 aa22.84■■□□□ 1.25
USP11-205ENST00000467378 EPB41L4AQ9HCS5 686 aaPredicted RBP22.84■■□□□ 1.25
USP11-205ENST00000467378 ATAD5Q96QE3 1844 aa22.84■■□□□ 1.25
USP11-205ENST00000467378 MYH8P13535 1937 aa22.83■■□□□ 1.25
USP11-205ENST00000467378 PHF20L1A8MW92 1017 aa22.83■■□□□ 1.25
USP11-205ENST00000467378 MAGEA10P43363 369 aaPredicted RBP22.83■■□□□ 1.25
USP11-205ENST00000467378 EVX2Q03828 476 aa22.83■■□□□ 1.25
USP11-205ENST00000467378 CTR9Q6PD62 1173 aa22.83■■□□□ 1.25
USP11-205ENST00000467378 SMCR8Q8TEV9 937 aaPredicted RBP22.83■■□□□ 1.25
USP11-205ENST00000467378 COA7Q96BR5 231 aa22.83■■□□□ 1.25
USP11-205ENST00000467378 DNAJC18Q9H819 358 aa22.83■■□□□ 1.25
USP11-205ENST00000467378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.83■■□□□ 1.25
USP11-205ENST00000467378 HERC5Q9UII4 1024 aaKnown RBP22.83■■□□□ 1.25
USP11-205ENST00000467378 ZHX2Q9Y6X8 837 aa22.83■■□□□ 1.25
USP11-205ENST00000467378 CCDC171Q6TFL3 1326 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 PHIPQ8WWQ0 1821 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 FAM196BA6NMK8 535 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 USP17L12C9JPN9 530 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 USP17L21D6R901 530 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 CYP2D6P10635 497 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 C12orf60Q5U649 245 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 VPS53Q5VIR6 699 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 ANKLE1Q8NAG6 615 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 DDRGK1Q96HY6 314 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 EHD4Q9H223 541 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 IL25Q9H293 177 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 PICK1Q9NRD5 415 aa22.82■■□□□ 1.24
USP11-205ENST00000467378 DOCK1Q14185 1865 aa22.81■■□□□ 1.24
USP11-205ENST00000467378 A0A0G2JLL6 359 aaPredicted RBP22.81■■□□□ 1.24
USP11-205ENST00000467378 APPP05067 770 aa22.81■■□□□ 1.24
USP11-205ENST00000467378 SBK1Q52WX2 424 aa22.81■■□□□ 1.24
USP11-205ENST00000467378 PRRT2Q7Z6L0 340 aaPredicted RBP22.81■■□□□ 1.24
USP11-205ENST00000467378 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.81■■□□□ 1.24
USP11-205ENST00000467378 UBE2OQ9C0C9 1292 aaKnown RBP22.81■■□□□ 1.24
USP11-205ENST00000467378 NBPF3Q9H094 633 aa22.81■■□□□ 1.24
USP11-205ENST00000467378 SERPINB13Q9UIV8 391 aa22.81■■□□□ 1.24
USP11-205ENST00000467378 CYP2D7A0A087X1C5 515 aa22.8■■□□□ 1.24
USP11-205ENST00000467378 SMIM22K7EJ46 135 aa22.8■■□□□ 1.24
USP11-205ENST00000467378 HSPD1P10809 573 aaKnown RBP22.8■■□□□ 1.24
USP11-205ENST00000467378 MFAP1P55081 439 aaKnown RBP22.8■■□□□ 1.24
USP11-205ENST00000467378 GABPAQ06546 454 aa22.8■■□□□ 1.24
USP11-205ENST00000467378 ARPP21Q9UBL0 812 aaPredicted RBP22.8■■□□□ 1.24
USP11-205ENST00000467378 SLC45A1Q9Y2W3 748 aa22.8■■□□□ 1.24
USP11-205ENST00000467378 RRP1BQ14684 758 aaKnown RBP22.79■■□□□ 1.24
USP11-205ENST00000467378 ALX1Q15699 326 aa22.79■■□□□ 1.24
USP11-205ENST00000467378 SCYL3Q8IZE3 742 aa22.79■■□□□ 1.24
USP11-205ENST00000467378 CRACR2BQ8N4Y2 399 aaPredicted RBP22.79■■□□□ 1.24
USP11-205ENST00000467378 ANKRD13CQ8N6S4 541 aa22.79■■□□□ 1.24
USP11-205ENST00000467378 RUFY2Q8WXA3 655 aa22.79■■□□□ 1.24
USP11-205ENST00000467378 NACAP1Q9BZK3 213 aa22.79■■□□□ 1.24
USP11-205ENST00000467378 RAD50Q92878 1312 aa22.79■■□□□ 1.24
USP11-205ENST00000467378 TDO2P48775 406 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms