RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 SOX10P56693 466 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 FKBP1CQ5VVH2 108 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 HHIPL2Q6UWX4 724 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.77□□□□□ -1.01
SND1-205ENST00000467238 FAM83AQ86UY5 434 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 WDR66Q8TBY9 1149 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 OPTNQ96CV9 577 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 DDRGK1Q96HY6 314 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 MEIS3Q99687 375 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 SIL1Q9H173 461 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 ELP3Q9H9T3 547 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 LRRFIP2Q9Y608 721 aaKnown RBP8.77□□□□□ -1.01
SND1-205ENST00000467238 PHIPQ8WWQ0 1821 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 RANBP2P49792 3224 aaKnown RBP8.76□□□□□ -1.01
SND1-205ENST00000467238 ATAD5Q96QE3 1844 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 TIMP2P16035 220 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 IL15P40933 162 aaPredicted RBP8.76□□□□□ -1.01
SND1-205ENST00000467238 VGLL4Q14135 290 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 ATP2B3Q16720 1220 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 FBXO46Q6PJ61 603 aaPredicted RBP8.76□□□□□ -1.01
SND1-205ENST00000467238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.76□□□□□ -1.01
SND1-205ENST00000467238 ARHGAP45Q92619 1136 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 PTPN18Q99952 460 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 PA2G4Q9UQ80 394 aaKnown RBP8.76□□□□□ -1.01
SND1-205ENST00000467238 HDAC5Q9UQL6 1122 aa8.76□□□□□ -1.01
SND1-205ENST00000467238 DOCK1Q14185 1865 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 PPFIA3O75145 1194 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 PRDX5P30044 214 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 PHKA1P46020 1223 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 CRHR2Q13324 411 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 INTS3Q68E01 1043 aaKnown RBP8.75□□□□□ -1.01
SND1-205ENST00000467238 OTUD7BQ6GQQ9 843 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 GPAT2Q6NUI2 795 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 SYMPKQ92797 1274 aaKnown RBP8.75□□□□□ -1.01
SND1-205ENST00000467238 TMOD2Q9NZR1 351 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 DAGLAQ9Y4D2 1042 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 SALL1Q9NSC2 1324 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 FOCADQ5VW36 1801 aa8.75□□□□□ -1.01
SND1-205ENST00000467238 SPDYE5A6NIY4 337 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 ADORA1P30542 326 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 NNTQ13423 1086 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 MTX1Q13505 466 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 DIXDC1Q155Q3 683 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 OTOP1Q7RTM1 612 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 BRI3BPQ8WY22 251 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 KLF16Q9BXK1 252 aaPredicted RBP8.74□□□□□ -1.01
SND1-205ENST00000467238 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 GNL3LQ9NVN8 582 aaKnown RBP8.74□□□□□ -1.01
SND1-205ENST00000467238 DENND2AQ9ULE3 1009 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 TRIM17Q9Y577 477 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 CSADQ9Y600 493 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 SNCAIPQ9Y6H5 919 aa8.74□□□□□ -1.01
SND1-205ENST00000467238 CCL15-CCL14A0A0B4J2E2 113 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 SRGAP3O43295 1099 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 LDHBP07195 334 aaKnown RBP8.73□□□□□ -1.01
SND1-205ENST00000467238 GNAI3P08754 354 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 MS4A1P11836 297 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 TRIM27P14373 513 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 GTF2A2P52657 109 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 GUCA2AQ02747 115 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 NFIAQ12857 509 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 CCL15Q16663 113 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 DCAF15Q66K64 600 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 CCDC102BQ68D86 513 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 CDC42EP5Q6NZY7 148 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 ERO1BQ86YB8 467 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 GPR161Q8N6U8 529 aaKnown RBP8.73□□□□□ -1.01
SND1-205ENST00000467238 CD99L2Q8TCZ2 262 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 FAM151AQ8WW52 585 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 ZKSCAN4Q969J2 545 aaPredicted RBP8.73□□□□□ -1.01
SND1-205ENST00000467238 HOOK2Q96ED9 719 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 ERO1AQ96HE7 468 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 WRNIP1Q96S55 665 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 NUDT12Q9BQG2 462 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 KRTAP4-8Q9BYQ9 185 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 SZT2Q5T011 3432 aa8.73□□□□□ -1.01
SND1-205ENST00000467238 MYH1P12882 1939 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 MAST2Q6P0Q8 1798 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 A0A1B0GUL7 405 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 IPO8O15397 1037 aaKnown RBP8.72□□□□□ -1.01
SND1-205ENST00000467238 CAP1Q01518 475 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 SP3Q02447 781 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 PPIL2Q13356 520 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 RASGRF1Q13972 1273 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 TAF1CQ15572 869 aaPredicted RBP8.72□□□□□ -1.01
SND1-205ENST00000467238 ATF7IPQ6VMQ6 1270 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 MIGA2Q7L4E1 593 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 FAM43AQ8N2R8 423 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 ZGPATQ8N5A5 531 aaKnown RBP8.72□□□□□ -1.01
SND1-205ENST00000467238 IL27Q8NEV9 243 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 ZNF341Q9BYN7 854 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 TNNQ9UQP3 1299 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 GAKO14976 1311 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
SND1-205ENST00000467238 RFX7Q2KHR2 1363 aa8.72□□□□□ -1.01
SND1-205ENST00000467238 SIPA1L1O43166 1804 aa8.71□□□□□ -1.01
SND1-205ENST00000467238 RNF225M0QZC1 329 aaPredicted RBP8.71□□□□□ -1.02
SND1-205ENST00000467238 BCAR3O75815 825 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms