RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 LBX1P52954 281 aa23.1■■□□□ 1.29
BCAS4-204ENST00000463943 GPAT2Q6NUI2 795 aa23.1■■□□□ 1.29
BCAS4-204ENST00000463943 FASTKD5Q7L8L6 764 aaKnown RBP23.1■■□□□ 1.29
BCAS4-204ENST00000463943 NBPF3Q9H094 633 aa23.1■■□□□ 1.29
BCAS4-204ENST00000463943 R3HDMLQ9H3Y0 253 aa23.1■■□□□ 1.29
BCAS4-204ENST00000463943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.1■■□□□ 1.29
BCAS4-204ENST00000463943 PDHXO00330 501 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 ZNF213O14771 459 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 CDC45O75419 566 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 ICA1Q05084 483 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 SH3D19Q5HYK7 790 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 FAM47AQ5JRC9 791 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 TREML2Q5T2D2 321 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 ANKRD23Q86SG2 305 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 TBC1D10CQ8IV04 446 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 FEZ1Q99689 392 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.09■■□□□ 1.29
BCAS4-204ENST00000463943 LAMA4Q16363 1823 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 LOC285556D6RIA3 1793 aa23.09■■□□□ 1.29
BCAS4-204ENST00000463943 GREB1LQ9C091 1923 aaPredicted RBP23.08■■□□□ 1.29
BCAS4-204ENST00000463943 A0A1W2PRG0 241 aa23.08■■□□□ 1.29
BCAS4-204ENST00000463943 CRHR2Q13324 411 aa23.08■■□□□ 1.29
BCAS4-204ENST00000463943 TAF1CQ15572 869 aaPredicted RBP23.08■■□□□ 1.29
BCAS4-204ENST00000463943 TOMM22Q9NS69 142 aa23.08■■□□□ 1.29
BCAS4-204ENST00000463943 C19orf81C9J6K1 198 aa23.07■■□□□ 1.28
BCAS4-204ENST00000463943 SIAH1Q8IUQ4 282 aa23.07■■□□□ 1.28
BCAS4-204ENST00000463943 PROCA1Q8NCQ7 364 aaPredicted RBP23.07■■□□□ 1.28
BCAS4-204ENST00000463943 TMOD4Q9NZQ9 345 aa23.07■■□□□ 1.28
BCAS4-204ENST00000463943 AGTPBP1Q9UPW5 1226 aa23.07■■□□□ 1.28
BCAS4-204ENST00000463943 TSPY3P0CV98 308 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 TSPY8P0CW00 308 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 TFAP4Q01664 338 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 ATP2B2Q01814 1243 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 IMMTQ16891 758 aaKnown RBP23.06■■□□□ 1.28
BCAS4-204ENST00000463943 RRP12Q5JTH9 1297 aaKnown RBP23.06■■□□□ 1.28
BCAS4-204ENST00000463943 CASC1Q6TDU7 716 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 CFHR5Q9BXR6 569 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 KANSL2Q9H9L4 492 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 EMILIN3Q9NT22 766 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 CTNNA3Q9UI47 895 aa23.06■■□□□ 1.28
BCAS4-204ENST00000463943 TSPY2A6NKD2 308 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 RANBP6O60518 1105 aaKnown RBP23.05■■□□□ 1.28
BCAS4-204ENST00000463943 FGRP09769 529 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 EEF2P13639 858 aaKnown RBP23.05■■□□□ 1.28
BCAS4-204ENST00000463943 AKNAD1Q5T1N1 836 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 STAG1Q8WVM7 1258 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 KIAA1683Q9H0B3 1180 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 ZCCHC17Q9NP64 241 aaKnown RBP23.05■■□□□ 1.28
BCAS4-204ENST00000463943 ORC4O43929 436 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 CYP2C8P10632 490 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 USP17L2Q6R6M4 530 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 MFSD6Q6ZSS7 791 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 KIAA1211Q6ZU35 1233 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 LSG1Q9H089 658 aaKnown RBP23.05■■□□□ 1.28
BCAS4-204ENST00000463943 ZFYVE28Q9HCC9 887 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 ARHGEF10LQ9HCE6 1279 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 ANO2Q9NQ90 1003 aa23.05■■□□□ 1.28
BCAS4-204ENST00000463943 NEDD4P46934 1319 aa23.04■■□□□ 1.28
BCAS4-204ENST00000463943 IGKV6D-41A0A0C4DH26 115 aa23.04■■□□□ 1.28
BCAS4-204ENST00000463943 USP14P54578 494 aa23.04■■□□□ 1.28
BCAS4-204ENST00000463943 NEDD1Q8NHV4 660 aa23.04■■□□□ 1.28
BCAS4-204ENST00000463943 NKX2-3Q8TAU0 364 aa23.04■■□□□ 1.28
BCAS4-204ENST00000463943 MAP4K1Q92918 833 aa23.04■■□□□ 1.28
BCAS4-204ENST00000463943 CEP95Q96GE4 821 aa23.04■■□□□ 1.28
BCAS4-204ENST00000463943 PLIN4Q96Q06 1357 aa23.04■■□□□ 1.28
BCAS4-204ENST00000463943 TMX2Q9Y320 296 aa23.03■■□□□ 1.28
BCAS4-204ENST00000463943 RBM8AQ9Y5S9 174 aaKnown RBP23.03■■□□□ 1.28
BCAS4-204ENST00000463943 U3KPZ7 1027 aaPredicted RBP23.03■■□□□ 1.28
BCAS4-204ENST00000463943 GPR25O00155 361 aa23.02■■□□□ 1.28
BCAS4-204ENST00000463943 NMT2O60551 498 aa23.02■■□□□ 1.28
BCAS4-204ENST00000463943 CYP21A2P08686 494 aa23.02■■□□□ 1.28
BCAS4-204ENST00000463943 C12orf42Q96LP6 360 aa23.02■■□□□ 1.28
BCAS4-204ENST00000463943 RNF41Q9H4P4 317 aaPredicted RBP23.02■■□□□ 1.28
BCAS4-204ENST00000463943 MTMR4Q9NYA4 1195 aa23.02■■□□□ 1.28
BCAS4-204ENST00000463943 CASP8AP2Q9UKL3 1982 aa23.01■■□□□ 1.27
BCAS4-204ENST00000463943 TLR2O60603 784 aa23.01■■□□□ 1.27
BCAS4-204ENST00000463943 VCAM1P19320 739 aa23.01■■□□□ 1.27
BCAS4-204ENST00000463943 KIAA1755Q5JYT7 1200 aa23.01■■□□□ 1.27
BCAS4-204ENST00000463943 ZNF296Q8WUU4 475 aaPredicted RBP23.01■■□□□ 1.27
BCAS4-204ENST00000463943 PARK7Q99497 189 aaKnown RBP23.01■■□□□ 1.27
BCAS4-204ENST00000463943 CLIP2Q9UDT6 1046 aa23.01■■□□□ 1.27
BCAS4-204ENST00000463943 SLC45A1Q9Y2W3 748 aa23.01■■□□□ 1.27
BCAS4-204ENST00000463943 PCP11498 1178 aaKnown RBP23■■□□□ 1.27
BCAS4-204ENST00000463943 SPICE1Q8N0Z3 855 aa23■■□□□ 1.27
BCAS4-204ENST00000463943 SH2D4AQ9H788 454 aa23■■□□□ 1.27
BCAS4-204ENST00000463943 IL17RBQ9NRM6 502 aa23■■□□□ 1.27
BCAS4-204ENST00000463943 NYAP2Q9P242 653 aa23■■□□□ 1.27
BCAS4-204ENST00000463943 TAF6LQ9Y6J9 622 aa23■■□□□ 1.27
BCAS4-204ENST00000463943 MYH4Q9Y623 1939 aa23■■□□□ 1.27
BCAS4-204ENST00000463943 RAD21O60216 631 aa22.99■■□□□ 1.27
BCAS4-204ENST00000463943 PABPC4Q13310 644 aaKnown RBP eCLIP22.99■■□□□ 1.27
BCAS4-204ENST00000463943 ASCC2Q9H1I8 757 aaPredicted RBP22.99■■□□□ 1.27
BCAS4-204ENST00000463943 VCPKMTQ9H867 229 aa22.99■■□□□ 1.27
BCAS4-204ENST00000463943 CPA4Q9UI42 421 aa22.99■■□□□ 1.27
BCAS4-204ENST00000463943 B4E1Z4 1266 aa22.98■■□□□ 1.27
BCAS4-204ENST00000463943 TTLL1O95922 423 aa22.98■■□□□ 1.27
BCAS4-204ENST00000463943 SMCR8Q8TEV9 937 aaPredicted RBP22.98■■□□□ 1.27
BCAS4-204ENST00000463943 ESR2Q92731 530 aa22.98■■□□□ 1.27
BCAS4-204ENST00000463943 PRDM10Q9NQV6 1147 aa22.98■■□□□ 1.27
BCAS4-204ENST00000463943 PNMA3Q9UL41 463 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms