RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.86■□□□□ 0.29
COL6A1-202ENST00000463060 MKL1Q969V6 931 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 ZNF274Q96GC6 653 aaPredicted RBP16.86■□□□□ 0.29
COL6A1-202ENST00000463060 LARP6Q9BRS8 491 aaKnown RBP16.86■□□□□ 0.29
COL6A1-202ENST00000463060 KANSL2Q9H9L4 492 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 FZD1Q9UP38 647 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 LIMCH1Q9UPQ0 1083 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
COL6A1-202ENST00000463060 APOBRQ0VD83 1088 aa16.85■□□□□ 0.29
COL6A1-202ENST00000463060 WTAPQ15007 396 aa16.85■□□□□ 0.29
COL6A1-202ENST00000463060 NOL9Q5SY16 702 aaKnown RBP16.85■□□□□ 0.29
COL6A1-202ENST00000463060 NYAP2Q9P242 653 aa16.85■□□□□ 0.29
COL6A1-202ENST00000463060 ZBTB21Q9ULJ3 1066 aa16.85■□□□□ 0.29
COL6A1-202ENST00000463060 ERICH2A1L162 156 aa16.84■□□□□ 0.29
COL6A1-202ENST00000463060 LARGE1O95461 756 aa16.84■□□□□ 0.29
COL6A1-202ENST00000463060 PDIA3P30101 505 aaKnown RBP16.84■□□□□ 0.29
COL6A1-202ENST00000463060 ME3Q16798 604 aa16.84■□□□□ 0.29
COL6A1-202ENST00000463060 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.84■□□□□ 0.29
COL6A1-202ENST00000463060 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
COL6A1-202ENST00000463060 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
COL6A1-202ENST00000463060 CABP5Q9NP86 173 aa16.84■□□□□ 0.29
COL6A1-202ENST00000463060 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
COL6A1-202ENST00000463060 MPHOSPH10O00566 681 aaKnown RBP16.83■□□□□ 0.28
COL6A1-202ENST00000463060 PPP1R12BO60237 982 aaPredicted RBP16.83■□□□□ 0.28
COL6A1-202ENST00000463060 TTLL1O95922 423 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 ASNSP08243 561 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 NF2P35240 595 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 ANP32AP39687 249 aaKnown RBP16.83■□□□□ 0.28
COL6A1-202ENST00000463060 MAP3K9P80192 1104 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 TROAPQ12815 778 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 LDLRAD1Q5T700 205 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 IFIT1BQ5T764 474 aaKnown RBP16.83■□□□□ 0.28
COL6A1-202ENST00000463060 APOA5Q6Q788 366 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 ZKSCAN4Q969J2 545 aaPredicted RBP16.83■□□□□ 0.28
COL6A1-202ENST00000463060 TMX3Q96JJ7 454 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 ZSCAN31Q96LW9 406 aaPredicted RBP16.83■□□□□ 0.28
COL6A1-202ENST00000463060 WRNIP1Q96S55 665 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 CLIP2Q9UDT6 1046 aa16.83■□□□□ 0.28
COL6A1-202ENST00000463060 NID2Q14112 1375 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 A0A1W2PRG0 241 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 K7ELQ4 463 aaPredicted RBP16.82■□□□□ 0.28
COL6A1-202ENST00000463060 TOP1P11387 765 aaKnown RBP16.82■□□□□ 0.28
COL6A1-202ENST00000463060 EEF2P13639 858 aaKnown RBP16.82■□□□□ 0.28
COL6A1-202ENST00000463060 RCAN1P53805 252 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 FGD1P98174 961 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 ST3GAL1Q11201 340 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 CUL4AQ13619 759 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 SCYL3Q8IZE3 742 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
COL6A1-202ENST00000463060 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 UNCXA6NJT0 531 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 PFKFB2O60825 505 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 PRKG1Q13976 671 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 RAB3GAP1Q15042 981 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 CST9Q5W186 159 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 ZNF654Q8IZM8 581 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 MAP3K14Q99558 947 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 SH2B1Q9NRF2 756 aaPredicted RBP16.81■□□□□ 0.28
COL6A1-202ENST00000463060 FAM217BQ9NTX9 383 aaPredicted RBP16.81■□□□□ 0.28
COL6A1-202ENST00000463060 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.81■□□□□ 0.28
COL6A1-202ENST00000463060 SYNPO2Q9UMS6 1093 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 STX8Q9UNK0 236 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 SNCAIPQ9Y6H5 919 aa16.81■□□□□ 0.28
COL6A1-202ENST00000463060 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 CEP350Q5VT06 3117 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 PASKQ96RG2 1323 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 PTPRAP18433 802 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 IREB2P48200 963 aaKnown RBP16.8■□□□□ 0.28
COL6A1-202ENST00000463060 FKBP1BP68106 108 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 ICA1Q05084 483 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
COL6A1-202ENST00000463060 HSCBQ8IWL3 235 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 PNMA1Q8ND90 353 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 ACER1Q8TDN7 264 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 WDR18Q9BV38 432 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 TMX2Q9Y320 296 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 SLC12A7Q9Y666 1083 aa16.8■□□□□ 0.28
COL6A1-202ENST00000463060 OTOFQ9HC10 1997 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 USP17L5A8MUK1 530 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 DDAH1O94760 285 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 SNHG28P0DPA3 235 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 VGLL4Q14135 290 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 ARMC9Q7Z3E5 817 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 CCDC84Q86UT8 332 aaPredicted RBP16.79■□□□□ 0.28
COL6A1-202ENST00000463060 ANKRD13AQ8IZ07 590 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 NECAB1Q8N987 351 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 GTF3C6Q969F1 213 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 PHIPQ8WWQ0 1821 aa16.79■□□□□ 0.28
COL6A1-202ENST00000463060 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 ZBTB43O43298 467 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 TOMM70O94826 608 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 SCRN1Q12765 414 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 BECN1Q14457 450 aa16.78■□□□□ 0.28
COL6A1-202ENST00000463060 CATIPQ7Z7H3 387 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms