RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ARPP21Q9UBL0 812 aaPredicted RBP12.23□□□□□ -0.45
SF3A3-204ENST00000462258 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
SF3A3-204ENST00000462258 ROBO3Q96MS0 1386 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 MKI67P46013 3256 aaKnown RBP12.22□□□□□ -0.45
SF3A3-204ENST00000462258 CYP2D7A0A087X1C5 515 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 RNF113AO15541 343 aaKnown RBP12.22□□□□□ -0.45
SF3A3-204ENST00000462258 MYCP01106 439 aaPredicted RBP12.22□□□□□ -0.45
SF3A3-204ENST00000462258 ZFYP08048 801 aaPredicted RBP12.22□□□□□ -0.45
SF3A3-204ENST00000462258 GUCY1A2P33402 732 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 HERVK_113P62684 666 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 AAMPQ13685 434 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 SEPT2Q15019 361 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 LRRFIP1Q32MZ4 808 aaKnown RBP12.22□□□□□ -0.45
SF3A3-204ENST00000462258 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 ACER1Q8TDN7 264 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 FSD1Q9BTV5 496 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 TMEM106CQ9BVX2 250 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 GABRQQ9UN88 632 aa12.22□□□□□ -0.45
SF3A3-204ENST00000462258 USP17L12C9JPN9 530 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 USP17L21D6R901 530 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 M0R2C6 588 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 GPAA1O43292 621 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 VCAM1P19320 739 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 GRK4P32298 578 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 FLT3LGP49771 235 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 ANKRD45Q5TZF3 282 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 C12orf60Q5U649 245 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 TMEM179Q6ZVK1 233 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 GTF3C2Q8WUA4 911 aaPredicted RBP12.21□□□□□ -0.45
SF3A3-204ENST00000462258 OSBP2Q969R2 916 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 COA7Q96BR5 231 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 STRBPQ96SI9 672 aaKnown RBP12.21□□□□□ -0.45
SF3A3-204ENST00000462258 MORF4L1Q9UBU8 362 aa12.21□□□□□ -0.45
SF3A3-204ENST00000462258 RLFQ13129 1914 aa12.21□□□□□ -0.46
SF3A3-204ENST00000462258 MYH4Q9Y623 1939 aa12.2□□□□□ -0.46
SF3A3-204ENST00000462258 SMIM22K7EJ46 135 aa12.2□□□□□ -0.46
SF3A3-204ENST00000462258 AKR1B1P15121 316 aa12.2□□□□□ -0.46
SF3A3-204ENST00000462258 ICA1Q05084 483 aa12.2□□□□□ -0.46
SF3A3-204ENST00000462258 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
SF3A3-204ENST00000462258 P2RX7Q99572 595 aaKnown RBP12.2□□□□□ -0.46
SF3A3-204ENST00000462258 PAGR1Q9BTK6 254 aa12.2□□□□□ -0.46
SF3A3-204ENST00000462258 EPB41L4AQ9HCS5 686 aaPredicted RBP12.2□□□□□ -0.46
SF3A3-204ENST00000462258 ZNF236Q9UL36 1845 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 GSG1L2A8MUP6 293 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L15C9J2P7 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L13C9JLJ4 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L11C9JVI0 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L18D6R9N7 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L22D6RA61 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L17D6RBQ6 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L19D6RCP7 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L20D6RJB6 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 ADCY3O60266 1144 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 GNAT2P19087 354 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 EN2P19622 333 aaPredicted RBP12.19□□□□□ -0.46
SF3A3-204ENST00000462258 TDO2P48775 406 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 CDK8P49336 464 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 ERVK-9P63128 1117 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 ERVK-24P63145 666 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 UBXN2AP68543 259 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 USP17L24Q0WX57 530 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 IRF5Q13568 498 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 MTFR1Q15390 333 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 GIMAP6Q6P9H5 292 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
SF3A3-204ENST00000462258 SH2D4AQ9H788 454 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 ARHGEF10LQ9HCE6 1279 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 TXNRD2Q9NNW7 524 aa12.19□□□□□ -0.46
SF3A3-204ENST00000462258 BIN2Q9UBW5 565 aaPredicted RBP12.19□□□□□ -0.46
SF3A3-204ENST00000462258 COL11A1P12107 1806 aaPredicted RBP12.18□□□□□ -0.46
SF3A3-204ENST00000462258 A0A1W2PRG0 241 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 PEX10O60683 326 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 INHAP05111 366 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 ELNP15502 786 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 SBK1Q52WX2 424 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 GPRC5AQ8NFJ5 357 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 PXYLP1Q8TE99 480 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 SEC62Q99442 399 aaKnown RBP12.18□□□□□ -0.46
SF3A3-204ENST00000462258 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
SF3A3-204ENST00000462258 FRMPD3Q5JV73 1810 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 SPDYE16A6NNV3 312 aaPredicted RBP12.17□□□□□ -0.46
SF3A3-204ENST00000462258 MINDY4BA8MYZ0 360 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 CCL5P13501 91 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 PDE1AP54750 535 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 ZMYM1Q5SVZ6 1142 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 CATSPERGQ6ZRH7 1159 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 SMC5Q8IY18 1101 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 TANGO6Q9C0B7 1094 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 RWDD1Q9H446 243 aaPredicted RBP12.17□□□□□ -0.46
SF3A3-204ENST00000462258 RBPJLQ9UBG7 517 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 STAP2Q9UGK3 403 aa12.17□□□□□ -0.46
SF3A3-204ENST00000462258 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
SF3A3-204ENST00000462258 CNMDO75829 334 aa12.16□□□□□ -0.46
SF3A3-204ENST00000462258 APPP05067 770 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms