RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 BAZ2BQ9UIF8 2168 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 ANKRD18BA2A2Z9 1011 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 MFAP3LO75121 409 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 GYPCP04921 128 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 CTSWP56202 376 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 WTAPQ15007 396 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 MFSD6Q6ZSS7 791 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 TRIM22Q8IYM9 498 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 TRIML1Q8N9V2 468 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 STRN4Q9NRL3 753 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 VPS54Q9P1Q0 977 aa13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 FEZ2Q9UHY8 353 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-203ENST00000462146 NLRP10Q86W26 655 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 WASF1Q92558 559 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 VPS18Q9P253 973 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 CDC23Q9UJX2 597 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 ASAP1Q9ULH1 1129 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 KIF5CO60282 957 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 ERCC5P28715 1186 aaPredicted RBP13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 ERVK-24P63145 666 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 KIF4BQ2VIQ3 1234 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 SPATA1Q5VX52 437 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 PAGE5Q96GU1 130 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 ZNF512BQ96KM6 892 aaPredicted RBP13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
PDZRN3-203ENST00000462146 DEXIO95424 95 aa13.33□□□□□ -0.27
PDZRN3-203ENST00000462146 RASGRF1Q13972 1273 aa13.33□□□□□ -0.27
PDZRN3-203ENST00000462146 BRD3Q15059 726 aa13.33□□□□□ -0.27
PDZRN3-203ENST00000462146 MUM1L1Q5H9M0 696 aa13.33□□□□□ -0.27
PDZRN3-203ENST00000462146 CDKAL1Q5VV42 579 aa13.33□□□□□ -0.27
PDZRN3-203ENST00000462146 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.27
PDZRN3-203ENST00000462146 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.27
PDZRN3-203ENST00000462146 CTNND2Q9UQB3 1225 aa13.33□□□□□ -0.27
PDZRN3-203ENST00000462146 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 IRS4O14654 1257 aaPredicted RBP13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 ATF3P18847 181 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 TDO2P48775 406 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 VSNL1P62760 191 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 ALX1Q15699 326 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 RASGRP2Q7LDG7 609 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 ZNF654Q8IZM8 581 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 SPATA5Q8NB90 893 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 BLZF1Q9H2G9 400 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 NID2Q14112 1375 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 TRIM66O15016 1216 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 GPS2Q13227 327 aa13.33□□□□□ -0.28
PDZRN3-203ENST00000462146 NUP98P52948 1817 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 ANKRD36CQ5JPF3 1778 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 GIGYF2Q6Y7W6 1299 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 FANCBQ8NB91 859 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 SLC4A4Q9Y6R1 1079 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 BAZ2AQ9UIF9 1905 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 WDR17Q8IZU2 1322 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 NOA1Q8NC60 698 aaKnown RBP13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 MSANTD4Q8NCY6 345 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 KRT23Q9C075 422 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 TRIM10Q9UDY6 481 aa13.32□□□□□ -0.28
PDZRN3-203ENST00000462146 CDHR2Q9BYE9 1310 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 NCAPH2Q6IBW4 605 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 CEP112Q8N8E3 955 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 EXOC4Q96A65 974 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 VPS16Q9H269 839 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 CNNM2Q9H8M5 875 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 RAB21Q9UL25 225 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 FAN1Q9Y2M0 1017 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 CTAGE9A4FU28 777 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 PHACTR2O75167 634 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 ZNF174Q15697 407 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 FOXR1Q6PIV2 292 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 PRDM11Q9NQV5 511 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 L1RE1Q9UN81 338 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 TFR2Q9UP52 801 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 PLEKHG2Q9H7P9 1386 aa13.31□□□□□ -0.28
PDZRN3-203ENST00000462146 SPATA31A3Q5VYP0 1347 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 TRIM75PA6NK02 468 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 FGFR2P21802 821 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 ARHGAP25P42331 645 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 KRT31Q15323 416 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 PKN1Q16512 942 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 AK7Q96M32 723 aa13.3□□□□□ -0.28
PDZRN3-203ENST00000462146 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms