RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PLPP7Q8NBV4 271 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 OPTNQ96CV9 577 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 TEPSINQ96N21 525 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 SMC4Q9NTJ3 1288 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 PA2G4Q9UQ80 394 aaKnown RBP5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 TRIM17Q9Y577 477 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 PPP2R3BQ9Y5P8 575 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 MYH2Q9UKX2 1941 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 IFIT1P09914 478 aaKnown RBP5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 ZBTB48P10074 688 aaPredicted RBP5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 INHBEP58166 350 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 TCP10Q12799 353 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 CRHR2Q13324 411 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 VGLL4Q14135 290 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 PUM3Q15397 648 aaKnown RBP5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 PKN2Q16513 984 aaKnown RBP5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 OXLD1Q5BKU9 147 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 APOBEC3HQ6NTF7 200 aaKnown RBP5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 LIAT1Q6ZQX7 453 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 ZKSCAN4Q969J2 545 aaPredicted RBP5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 TEKT1Q969V4 418 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 EMID1Q96A84 441 aaPredicted RBP5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 TNNQ9UQP3 1299 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 LRRFIP2Q9Y608 721 aaKnown RBP5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 DOCK3Q8IZD9 2030 aa5.85□□□□□ -1.47
GTF3C3-208ENST00000455546 ALDH1A1P00352 501 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 UBTFL1P0CB47 393 aaPredicted RBP5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 SLURP2P0DP57 97 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 SLC5A1P13866 664 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 ADORA1P30542 326 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 TNNI2P48788 182 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 TIMM10P62072 90 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 HDLBPQ00341 1268 aaKnown RBP5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 TNFAIP1Q13829 316 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 ARID5BQ14865 1188 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 ALDH1L2Q3SY69 923 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 FBXO46Q6PJ61 603 aaPredicted RBP5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 OTOP1Q7RTM1 612 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 ZFPM1Q8IX07 1006 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 FAM43AQ8N2R8 423 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 PHTF2Q8N3S3 785 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 EHBP1Q8NDI1 1231 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 CD99L2Q8TCZ2 262 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 TBC1D22AQ8WUA7 517 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 BRI3BPQ8WY22 251 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 LPIN2Q92539 896 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 ZDHHC15Q96MV8 337 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 MEIS3Q99687 375 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 C1QTNF2Q9BXJ5 285 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 CFHR5Q9BXR6 569 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 ARAP2Q8WZ64 1704 aa5.84□□□□□ -1.47
GTF3C3-208ENST00000455546 COL1A1P02452 1464 aaPredicted RBP5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 ZSWIM8A7E2V4 1837 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 CCL15-CCL14A0A0B4J2E2 113 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 BCAR3O75815 825 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 MYCP01106 439 aaPredicted RBP5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 PRDX5P30044 214 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 INPP5BP32019 993 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 PHKA1P46020 1223 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 RARSP54136 660 aaKnown RBP5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 SP3Q02447 781 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 NFIAQ12857 509 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 CCL15Q16663 113 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 ATP2B3Q16720 1220 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 NOM1Q5C9Z4 860 aaKnown RBP5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 OTUD7BQ6GQQ9 843 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 CDC42EP5Q6NZY7 148 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 HHIPL2Q6UWX4 724 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 WDR66Q8TBY9 1149 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 WRNIP1Q96S55 665 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 MRIQ9BWK5 157 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 VRTNQ9H8Y1 702 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 USP40Q9NVE5 1235 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 TMOD2Q9NZR1 351 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 DOLKQ9UPQ8 538 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 PTPN22Q9Y2R2 807 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 CSADQ9Y600 493 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 LAMB1P07942 1786 aa5.83□□□□□ -1.48
GTF3C3-208ENST00000455546 MYO5AQ9Y4I1 1855 aaKnown RBP5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 UNCXA6NJT0 531 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 BTBD19C9JJ37 291 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 CIAO1O76071 339 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 LDHBP07195 334 aaKnown RBP5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 GTF2A2P52657 109 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 TFCP2Q12800 502 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 TAF1CQ15572 869 aaPredicted RBP5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 NBPF20Q3BBV1 942 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 CRTC2Q53ET0 693 aaPredicted RBP5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 CCDC102BQ68D86 513 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 TRAF7Q6Q0C0 670 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 VASH1Q7L8A9 365 aaPredicted RBP5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 ERO1BQ86YB8 467 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 STK32AQ8WU08 396 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 ZNF592Q92610 1267 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 FRAT1Q92837 279 aaPredicted RBP5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 ERO1AQ96HE7 468 aa5.82□□□□□ -1.48
GTF3C3-208ENST00000455546 NEUROD6Q96NK8 337 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms