RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 PARK7Q99497 189 aaKnown RBP17.49■□□□□ 0.39
VPS16-205ENST00000453689 NACAP1Q9BZK3 213 aa17.49■□□□□ 0.39
VPS16-205ENST00000453689 RLFQ13129 1914 aa17.49■□□□□ 0.39
VPS16-205ENST00000453689 CYP2C8P10632 490 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 AKR1B1P15121 316 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 VPS53Q5VIR6 699 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 TMEM179Q6ZVK1 233 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 ERO1AQ96HE7 468 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 NAPBQ9H115 298 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 TMOD4Q9NZQ9 345 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 CPA4Q9UI42 421 aa17.48■□□□□ 0.39
VPS16-205ENST00000453689 CAP1Q01518 475 aa17.47■□□□□ 0.39
VPS16-205ENST00000453689 C17orf99Q6UX52 265 aa17.47■□□□□ 0.39
VPS16-205ENST00000453689 ZNF589Q86UQ0 364 aaPredicted RBP17.47■□□□□ 0.39
VPS16-205ENST00000453689 ACER1Q8TDN7 264 aa17.47■□□□□ 0.39
VPS16-205ENST00000453689 FEZ1Q99689 392 aa17.47■□□□□ 0.39
VPS16-205ENST00000453689 DIAPH3Q9NSV4 1193 aa17.47■□□□□ 0.39
VPS16-205ENST00000453689 COL11A1P12107 1806 aaPredicted RBP17.47■□□□□ 0.39
VPS16-205ENST00000453689 ZYXQ15942 572 aaKnown RBP17.46■□□□□ 0.39
VPS16-205ENST00000453689 USP17L2Q6R6M4 530 aa17.46■□□□□ 0.39
VPS16-205ENST00000453689 KIAA1683Q9H0B3 1180 aa17.46■□□□□ 0.39
VPS16-205ENST00000453689 EMILIN3Q9NT22 766 aa17.46■□□□□ 0.39
VPS16-205ENST00000453689 PNMA3Q9UL41 463 aa17.46■□□□□ 0.39
VPS16-205ENST00000453689 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.38
VPS16-205ENST00000453689 BCRP11274 1271 aa17.45■□□□□ 0.38
VPS16-205ENST00000453689 RASA1P20936 1047 aa17.45■□□□□ 0.38
VPS16-205ENST00000453689 PPARAQ07869 468 aa17.45■□□□□ 0.38
VPS16-205ENST00000453689 PABPC4Q13310 644 aaKnown RBP eCLIP17.45■□□□□ 0.38
VPS16-205ENST00000453689 OTOP1Q7RTM1 612 aa17.45■□□□□ 0.38
VPS16-205ENST00000453689 CLEC10AQ8IUN9 316 aa17.45■□□□□ 0.38
VPS16-205ENST00000453689 C12orf42Q96LP6 360 aa17.45■□□□□ 0.38
VPS16-205ENST00000453689 MKNK2Q9HBH9 465 aa17.45■□□□□ 0.38
VPS16-205ENST00000453689 TRIM17Q9Y577 477 aa17.45■□□□□ 0.38
VPS16-205ENST00000453689 A0A1W2PRG0 241 aa17.44■□□□□ 0.38
VPS16-205ENST00000453689 HSPD1P10809 573 aaKnown RBP17.44■□□□□ 0.38
VPS16-205ENST00000453689 OSBPP22059 807 aa17.44■□□□□ 0.38
VPS16-205ENST00000453689 CHMLP26374 656 aa17.44■□□□□ 0.38
VPS16-205ENST00000453689 HOXA7P31268 230 aaPredicted RBP17.44■□□□□ 0.38
VPS16-205ENST00000453689 USP14P54578 494 aa17.44■□□□□ 0.38
VPS16-205ENST00000453689 LACTBP83111 547 aaPredicted RBP17.44■□□□□ 0.38
VPS16-205ENST00000453689 ALX1Q15699 326 aa17.44■□□□□ 0.38
VPS16-205ENST00000453689 PKN2Q16513 984 aaKnown RBP17.44■□□□□ 0.38
VPS16-205ENST00000453689 IFFO2Q5TF58 517 aa17.44■□□□□ 0.38
VPS16-205ENST00000453689 CWC27Q6UX04 472 aaKnown RBP17.44■□□□□ 0.38
VPS16-205ENST00000453689 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
VPS16-205ENST00000453689 ABHD8Q96I13 439 aa17.44■□□□□ 0.38
VPS16-205ENST00000453689 ASCC2Q9H1I8 757 aaPredicted RBP17.44■□□□□ 0.38
VPS16-205ENST00000453689 PLXNB2O15031 1838 aa17.43■□□□□ 0.38
VPS16-205ENST00000453689 CDC45O75419 566 aa17.43■□□□□ 0.38
VPS16-205ENST00000453689 MFAP1P55081 439 aaKnown RBP17.43■□□□□ 0.38
VPS16-205ENST00000453689 ICA1Q05084 483 aa17.43■□□□□ 0.38
VPS16-205ENST00000453689 SIAH1Q8IUQ4 282 aa17.43■□□□□ 0.38
VPS16-205ENST00000453689 ARHGAP39Q9C0H5 1083 aa17.43■□□□□ 0.38
VPS16-205ENST00000453689 EFCC1Q9HA90 598 aa17.43■□□□□ 0.38
VPS16-205ENST00000453689 A0A0G2JMZ2 1700 aa17.43■□□□□ 0.38
VPS16-205ENST00000453689 PRDM1O75626 825 aa17.42■□□□□ 0.38
VPS16-205ENST00000453689 FBXO46Q6PJ61 603 aaPredicted RBP17.42■□□□□ 0.38
VPS16-205ENST00000453689 RUFY2Q8WXA3 655 aa17.42■□□□□ 0.38
VPS16-205ENST00000453689 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.42■□□□□ 0.38
VPS16-205ENST00000453689 ZNF287Q9HBT7 754 aa17.42■□□□□ 0.38
VPS16-205ENST00000453689 ARHGEF10LQ9HCE6 1279 aa17.42■□□□□ 0.38
VPS16-205ENST00000453689 ZMYM6O95789 1325 aa17.42■□□□□ 0.38
VPS16-205ENST00000453689 RAD50Q92878 1312 aa17.42■□□□□ 0.38
VPS16-205ENST00000453689 ECM2O94769 699 aaPredicted RBP17.41■□□□□ 0.38
VPS16-205ENST00000453689 FGAP02671 866 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 SLC3A2P08195 630 aaKnown RBP17.41■□□□□ 0.38
VPS16-205ENST00000453689 VCAM1P19320 739 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 CTGFP29279 349 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 IRX3P78415 501 aaPredicted RBP17.41■□□□□ 0.38
VPS16-205ENST00000453689 CTDSPL2Q05D32 466 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 PDE4BQ07343 736 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 KIF22Q14807 665 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 CASC1Q6TDU7 716 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 ZNF444Q8N0Y2 327 aaPredicted RBP17.41■□□□□ 0.38
VPS16-205ENST00000453689 ANKRD13CQ8N6S4 541 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 KANSL2Q9H9L4 492 aa17.41■□□□□ 0.38
VPS16-205ENST00000453689 EEF2P13639 858 aaKnown RBP17.4■□□□□ 0.38
VPS16-205ENST00000453689 GCLCP48506 637 aaPredicted RBP17.4■□□□□ 0.38
VPS16-205ENST00000453689 ARHGEF6Q15052 776 aa17.4■□□□□ 0.38
VPS16-205ENST00000453689 P2RX7Q99572 595 aaKnown RBP17.4■□□□□ 0.38
VPS16-205ENST00000453689 ANAPC4Q9UJX5 808 aa17.4■□□□□ 0.38
VPS16-205ENST00000453689 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.4■□□□□ 0.38
VPS16-205ENST00000453689 TMX2Q9Y320 296 aa17.4■□□□□ 0.38
VPS16-205ENST00000453689 RBBP6Q7Z6E9 1792 aaKnown RBP17.4■□□□□ 0.38
VPS16-205ENST00000453689 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
VPS16-205ENST00000453689 ZNFX1Q9P2E3 1918 aaKnown RBP17.39■□□□□ 0.37
VPS16-205ENST00000453689 USP17L15C9J2P7 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 USP17L13C9JLJ4 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 USP17L11C9JVI0 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 USP17L18D6R9N7 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 USP17L22D6RA61 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 USP17L17D6RBQ6 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 USP17L19D6RCP7 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 USP17L20D6RJB6 530 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 CAPN15O75808 1086 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 PSMC4P43686 418 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 HERVK_113P62684 666 aa17.39■□□□□ 0.37
VPS16-205ENST00000453689 ATP2B2Q01814 1243 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms