RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 GIPRP48546 466 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 RAC1P63000 192 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 LMNB2Q03252 620 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 CACNB2Q08289 660 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 SLC20A2Q08357 652 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 MTERF2Q49AM1 385 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 VPS53Q5VIR6 699 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 SYDE2Q5VT97 1194 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 CHST15Q7LFX5 561 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 ZBTB46Q86UZ6 589 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 ANAPC16Q96DE5 110 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 SMAD5Q99717 465 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 LSM14BQ9BX40 385 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 TRHDEQ9UKU6 1024 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 MKL2Q9ULH7 1088 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 RRP15Q9Y3B9 282 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 EIF1AYO14602 144 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 GRK6P43250 576 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBR3-206ENST00000444475 USP51Q70EK9 711 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 SRLQ86TD4 932 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 TRMT2AQ8IZ69 625 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 ST13P5Q8NFI4 369 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 HIC2Q96JB3 615 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 CLUHP3Q96NS8 147 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 NLRP3Q96P20 1036 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 LMAN2LQ9H0V9 348 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 TRMT1Q9NXH9 659 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 TRIM29Q14134 588 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 SMC1AQ14683 1233 aaKnown RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 LONRF2Q1L5Z9 754 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 ANKRD39Q53RE8 183 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 IRGCQ6NXR0 463 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 TLDC1Q6P9B6 456 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 B3GNT9Q6UX72 402 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 MTMR8Q96EF0 704 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 ASB2Q96Q27 587 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 PUS7LQ9H0K6 701 aaKnown RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 TNKS2Q9H2K2 1166 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 SLC12A5Q9H2X9 1139 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 FBRSQ9HAH7 460 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 K7ESF4 209 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 GIPC1O14908 333 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 AKR1B10O60218 316 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 MBD4O95243 580 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 GJB6O95452 261 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 IFIT1P09914 478 aaKnown RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 COX10Q12887 443 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 INAVAQ3KP66 663 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 TTC31Q49AM3 519 aaPredicted RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 RILPL1Q5EBL4 403 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 RNF20Q5VTR2 975 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 TYW1BQ6NUM6 668 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 C16orf46Q6P387 395 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 FBXL19Q6PCT2 694 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 NEK10Q6ZWH5 1172 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 NRSN1Q8IZ57 195 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 STIM2Q9P246 746 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 HMGXB3Q12766 1538 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 KDM4FA0A1W2PPD8 638 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 DDX58O95786 925 aaKnown RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 ASGR2P07307 311 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 ZKSCAN1P17029 563 aaPredicted RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 IL4RP24394 825 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 ITKQ08881 620 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 COX20Q5RI15 118 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 PI16Q6UXB8 463 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 TMEM92Q6UXU6 159 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 ABTB2Q8N961 1025 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 NAT8LQ8N9F0 302 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 ZSWIM2Q8NEG5 633 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 PARD3BQ8TEW8 1205 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 KISS1RQ969F8 398 aaPredicted RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 RBM18Q96H35 190 aaKnown RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 SGCZQ96LD1 299 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 MOGAT1Q96PD6 335 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 HECAQ9UBI9 543 aaPredicted RBP4.61□□□□□ -1.67
UBR3-206ENST00000444475 FAM8A1Q9UBU6 413 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 POLIQ9UNA4 740 aa4.61□□□□□ -1.67
UBR3-206ENST00000444475 BAG2O95816 211 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 SMARCA1P28370 1054 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 STIP1P31948 543 aaKnown RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 EIF4A3P38919 411 aaKnown RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 LYPD8Q6UX82 237 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 CARNMT1Q8N4J0 409 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 DPF3Q92784 378 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 JAKMIP2Q96AA8 810 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 HINFPQ9BQA5 517 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 AGO4Q9HCK5 861 aaKnown RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 MRGBPQ9NV56 204 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 BLOC1S6Q9UL45 172 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 PIK3R4Q99570 1358 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 LMTK3Q96Q04 1460 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 LOC102724428A0A0B4J2F2 783 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 A6NNZ2 444 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 KIF5CO60282 957 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 FBXO21O94952 628 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 POU3F2P20265 443 aaPredicted RBP4.6□□□□□ -1.67
UBR3-206ENST00000444475 CLCN6P51797 869 aa4.6□□□□□ -1.67
UBR3-206ENST00000444475 SIK1P57059 783 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms