RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 BNIP3LO60238 219 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 CAMTA2O94983 1202 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 MAPTP10636 758 aaKnown RBP8.83□□□□□ -1
R3HDM1-210ENST00000443537 RFC4P35249 363 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 TNP2Q05952 138 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 SFSWAPQ12872 951 aaKnown RBP8.83□□□□□ -1
R3HDM1-210ENST00000443537 MTX1Q13505 466 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 TRAPPC3LQ5T215 181 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 TTLL7Q6ZT98 887 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 PTF1AQ7RTS3 328 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 TMC7Q7Z402 723 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 GCC1Q96CN9 775 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 MYD88Q99836 296 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 USP44Q9H0E7 712 aa8.83□□□□□ -1
R3HDM1-210ENST00000443537 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
R3HDM1-210ENST00000443537 CDHR2Q9BYE9 1310 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 USP42Q9H9J4 1324 aaKnown RBP8.82□□□□□ -1
R3HDM1-210ENST00000443537 XYLBO75191 536 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 PCCAP05165 728 aaPredicted RBP8.82□□□□□ -1
R3HDM1-210ENST00000443537 IGKV5-2P06315 115 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 ERCC3P19447 782 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 EHHADHQ08426 723 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 HSP90AB4PQ58FF6 505 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 DNAJC14Q6Y2X3 702 aaPredicted RBP8.82□□□□□ -1
R3HDM1-210ENST00000443537 PPP1R42Q7Z4L9 355 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 ZNF34Q8IZ26 560 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 GJD3Q8N144 294 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 ZBTB38Q8NAP3 1195 aaPredicted RBP8.82□□□□□ -1
R3HDM1-210ENST00000443537 MEIS3Q99687 375 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 NYXQ9GZU5 481 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 LRRC4BQ9NT99 713 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 MARK1Q9P0L2 795 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 ATXN7L1Q9ULK2 861 aaPredicted RBP8.82□□□□□ -1
R3HDM1-210ENST00000443537 TNNQ9UQP3 1299 aa8.82□□□□□ -1
R3HDM1-210ENST00000443537 RIC1Q4ADV7 1423 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 EFSO43281 561 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 CD33P20138 364 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 PIP4K2AP48426 406 aaPredicted RBP8.81□□□□□ -1
R3HDM1-210ENST00000443537 LAMC2Q13753 1193 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 UBAP2LQ14157 1087 aaKnown RBP8.81□□□□□ -1
R3HDM1-210ENST00000443537 ANKRD44Q8N8A2 993 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 RGS22Q8NE09 1264 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 DMRTB1Q96MA1 342 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 CAMKK2Q96RR4 588 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 PLA2G12BQ9BX93 195 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 CARMIL3Q8ND23 1372 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 CASZ1Q86V15 1759 aa8.81□□□□□ -1
R3HDM1-210ENST00000443537 DDX60Q8IY21 1712 aaKnown RBP8.8□□□□□ -1
R3HDM1-210ENST00000443537 A6NHS1 94 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 FGFR3P22607 806 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 CWF19L2Q2TBE0 894 aaKnown RBP8.8□□□□□ -1
R3HDM1-210ENST00000443537 CEP85Q6P2H3 762 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 KRT25Q7Z3Z0 450 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 ZNF438Q7Z4V0 828 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 NLRP10Q86W26 655 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 FOXD4L4Q8WXT5 416 aaPredicted RBP8.8□□□□□ -1
R3HDM1-210ENST00000443537 PNMA5Q96PV4 448 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 NDFIP2Q9NV92 336 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 STK32BQ9NY57 414 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 TFCP2L1Q9NZI6 479 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 KCNMB2Q9Y691 235 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 NRXN2Q9P2S2 1712 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 KDM2BQ8NHM5 1336 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 SH3TC1Q8TE82 1336 aa8.8□□□□□ -1
R3HDM1-210ENST00000443537 NBPF7P0C2Y1 421 aaPredicted RBP8.79□□□□□ -1
R3HDM1-210ENST00000443537 KCNQ4P56696 695 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 ATP8B2P98198 1209 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 CCINQ13939 588 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 TRIP4Q15650 581 aaPredicted RBP8.79□□□□□ -1
R3HDM1-210ENST00000443537 RABL6Q3YEC7 729 aaPredicted RBP8.79□□□□□ -1
R3HDM1-210ENST00000443537 UBE3BQ7Z3V4 1068 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 SMC5Q8IY18 1101 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 NLGN1Q8N2Q7 840 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 NANOS1Q8WY41 292 aaKnown RBP8.79□□□□□ -1
R3HDM1-210ENST00000443537 SETDB2Q96T68 719 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 FAM129BQ96TA1 746 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 UTP14AQ9BVJ6 771 aaKnown RBP8.79□□□□□ -1
R3HDM1-210ENST00000443537 CFHR5Q9BXR6 569 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 NIF3L1Q9GZT8 377 aa8.79□□□□□ -1
R3HDM1-210ENST00000443537 NIP7Q9Y221 180 aaKnown RBP eCLIP8.79□□□□□ -1
R3HDM1-210ENST00000443537 LRRFIP2Q9Y608 721 aaKnown RBP8.79□□□□□ -1
R3HDM1-210ENST00000443537 RTL9Q8NET4 1388 aa8.78□□□□□ -1
R3HDM1-210ENST00000443537 GRNP28799 593 aaKnown RBP8.78□□□□□ -1
R3HDM1-210ENST00000443537 CASP7P55210 303 aa8.78□□□□□ -1
R3HDM1-210ENST00000443537 PLCB3Q01970 1234 aa8.78□□□□□ -1
R3HDM1-210ENST00000443537 TPTE2Q6XPS3 522 aa8.78□□□□□ -1
R3HDM1-210ENST00000443537 ERC1Q8IUD2 1116 aa8.78□□□□□ -1
R3HDM1-210ENST00000443537 SSH3Q8TE77 659 aa8.78□□□□□ -1
R3HDM1-210ENST00000443537 SLC16A10Q8TF71 515 aa8.78□□□□□ -1
R3HDM1-210ENST00000443537 TRMT112Q9UI30 125 aaKnown RBP8.78□□□□□ -1
R3HDM1-210ENST00000443537 PRR12Q9ULL5 1215 aa8.78□□□□□ -1
R3HDM1-210ENST00000443537 H3BM21 787 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 GPR182O15218 404 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 SRGAP3O43295 1099 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 PDE8AO60658 829 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 RAB11FIP3O75154 756 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 SASH3O75995 380 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 MAPK8P45983 427 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 SPEM2Q0P670 501 aa8.77□□□□□ -1.01
R3HDM1-210ENST00000443537 SLC15A2Q16348 729 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms