RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00642-202ENST00000442515 IVNS1ABPQ9Y6Y0 642 aa17.2■□□□□ 0.34
LINC00642-202ENST00000442515 FLT1P17948 1338 aa17.2■□□□□ 0.34
LINC00642-202ENST00000442515 SIPA1L1O43166 1804 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L15C9J2P7 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L13C9JLJ4 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L11C9JVI0 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L18D6R9N7 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L22D6RA61 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L17D6RBQ6 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L19D6RCP7 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L20D6RJB6 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 PLA2G5P39877 138 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 USP17L24Q0WX57 530 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 TFCP2Q12800 502 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 ZYXQ15942 572 aaKnown RBP17.19■□□□□ 0.34
LINC00642-202ENST00000442515 TGFBRAP1Q8WUH2 860 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 AKAP2Q9Y2D5 859 aa17.19■□□□□ 0.34
LINC00642-202ENST00000442515 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
LINC00642-202ENST00000442515 ITGB8P26012 769 aa17.18■□□□□ 0.34
LINC00642-202ENST00000442515 EPHB4P54760 987 aa17.18■□□□□ 0.34
LINC00642-202ENST00000442515 FOXP4Q8IVH2 680 aaPredicted RBP17.18■□□□□ 0.34
LINC00642-202ENST00000442515 FEZ1Q99689 392 aa17.18■□□□□ 0.34
LINC00642-202ENST00000442515 NOL10Q9BSC4 688 aaKnown RBP17.18■□□□□ 0.34
LINC00642-202ENST00000442515 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
LINC00642-202ENST00000442515 PALD1Q9ULE6 856 aa17.18■□□□□ 0.34
LINC00642-202ENST00000442515 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.18■□□□□ 0.34
LINC00642-202ENST00000442515 SEPT4O43236 478 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 GH2P01242 217 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 DNAJB2P25686 324 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 ARID4AP29374 1257 aaPredicted RBP17.17■□□□□ 0.34
LINC00642-202ENST00000442515 ADCYAP1R1P41586 468 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 C1orf53Q5VUE5 145 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 LBX2Q6XYB7 198 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 CATSPERGQ6ZRH7 1159 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 NEUROD6Q96NK8 337 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 LRP2BPQ9P2M1 347 aa17.17■□□□□ 0.34
LINC00642-202ENST00000442515 BAG3O95817 575 aa17.16■□□□□ 0.34
LINC00642-202ENST00000442515 PLCG2P16885 1265 aa17.16■□□□□ 0.34
LINC00642-202ENST00000442515 VCAM1P19320 739 aa17.16■□□□□ 0.34
LINC00642-202ENST00000442515 MCAMP43121 646 aa17.16■□□□□ 0.34
LINC00642-202ENST00000442515 TLE2Q04725 743 aa17.16■□□□□ 0.34
LINC00642-202ENST00000442515 OLFML2BQ68BL8 750 aa17.16■□□□□ 0.34
LINC00642-202ENST00000442515 SPDYE16A6NNV3 312 aaPredicted RBP17.15■□□□□ 0.34
LINC00642-202ENST00000442515 ADORA2AP29274 412 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 USP14P54578 494 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 LRRC41Q15345 812 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 GORABQ5T7V8 394 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
LINC00642-202ENST00000442515 ADGRA1Q86SQ6 560 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 DPP9Q86TI2 863 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 FAM122AQ96E09 287 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 SAP30BPQ9UHR5 308 aaKnown RBP17.15■□□□□ 0.34
LINC00642-202ENST00000442515 TACC3Q9Y6A5 838 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 RLFQ13129 1914 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 ZNF521Q96K83 1311 aa17.15■□□□□ 0.34
LINC00642-202ENST00000442515 HLA-DOAP06340 250 aa17.14■□□□□ 0.33
LINC00642-202ENST00000442515 CLTBP09497 229 aa17.14■□□□□ 0.33
LINC00642-202ENST00000442515 PPP4CP60510 307 aa17.14■□□□□ 0.33
LINC00642-202ENST00000442515 FAM47AQ5JRC9 791 aa17.14■□□□□ 0.33
LINC00642-202ENST00000442515 ATXN2LQ8WWM7 1075 aaKnown RBP17.14■□□□□ 0.33
LINC00642-202ENST00000442515 ZNF576Q9H609 170 aa17.14■□□□□ 0.33
LINC00642-202ENST00000442515 ADAMTS19Q8TE59 1207 aa17.13■□□□□ 0.33
LINC00642-202ENST00000442515 TIFAQ96CG3 184 aa17.13■□□□□ 0.33
LINC00642-202ENST00000442515 MEIS3Q99687 375 aa17.13■□□□□ 0.33
LINC00642-202ENST00000442515 KIAA1683Q9H0B3 1180 aa17.13■□□□□ 0.33
LINC00642-202ENST00000442515 THEGQ9P2T0 379 aa17.13■□□□□ 0.33
LINC00642-202ENST00000442515 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
LINC00642-202ENST00000442515 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.12■□□□□ 0.33
LINC00642-202ENST00000442515 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.12■□□□□ 0.33
LINC00642-202ENST00000442515 KIAA0355O15063 1070 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 RAG1P15918 1043 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 FPGSQ05932 587 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 RAB3GAP1Q15042 981 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 PRAMEF19Q5SWL8 479 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 ATF7IPQ6VMQ6 1270 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 ACER1Q8TDN7 264 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 PPM1EQ8WY54 764 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 MOV10L1Q9BXT6 1211 aaKnown RBP17.12■□□□□ 0.33
LINC00642-202ENST00000442515 RPAP3Q9H6T3 665 aaPredicted RBP17.12■□□□□ 0.33
LINC00642-202ENST00000442515 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 PHF24Q9UPV7 400 aa17.12■□□□□ 0.33
LINC00642-202ENST00000442515 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
LINC00642-202ENST00000442515 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
LINC00642-202ENST00000442515 COBLO75128 1261 aa17.11■□□□□ 0.33
LINC00642-202ENST00000442515 ALDH1L2Q3SY69 923 aa17.11■□□□□ 0.33
LINC00642-202ENST00000442515 TATDN1Q6P1N9 297 aa17.11■□□□□ 0.33
LINC00642-202ENST00000442515 UHRF1Q96T88 793 aaPredicted RBP17.11■□□□□ 0.33
LINC00642-202ENST00000442515 CHD7Q9P2D1 2997 aa17.1■□□□□ 0.33
LINC00642-202ENST00000442515 STRNO43815 780 aa17.1■□□□□ 0.33
LINC00642-202ENST00000442515 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
LINC00642-202ENST00000442515 MAP3K12Q12852 859 aa17.1■□□□□ 0.33
LINC00642-202ENST00000442515 GAS2L1Q99501 681 aaPredicted RBP17.1■□□□□ 0.33
LINC00642-202ENST00000442515 SPATC1LQ9H0A9 340 aa17.1■□□□□ 0.33
LINC00642-202ENST00000442515 SNRKQ9NRH2 765 aa17.1■□□□□ 0.33
LINC00642-202ENST00000442515 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms