RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 GUCY1A2P33402 732 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 CAP2P40123 477 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 APOA5Q6Q788 366 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 NFXL1Q6ZNB6 911 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 ZNF341Q9BYN7 854 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 GH2P01242 217 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 SLC4A3P48751 1232 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 CUL4AQ13619 759 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 CDCA5Q96FF9 252 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 HPS5Q9UPZ3 1129 aa24.72■■□□□ 1.55
VPS13B-204ENST00000441350 PFKFB2O60825 505 aa24.71■■□□□ 1.55
VPS13B-204ENST00000441350 KANSL2Q9H9L4 492 aa24.71■■□□□ 1.55
VPS13B-204ENST00000441350 CABP5Q9NP86 173 aa24.71■■□□□ 1.55
VPS13B-204ENST00000441350 STX8Q9UNK0 236 aa24.71■■□□□ 1.55
VPS13B-204ENST00000441350 SLC12A7Q9Y666 1083 aa24.71■■□□□ 1.55
VPS13B-204ENST00000441350 SEPT2Q15019 361 aa24.7■■□□□ 1.54
VPS13B-204ENST00000441350 PPP4R3BQ5MIZ7 849 aa24.7■■□□□ 1.54
VPS13B-204ENST00000441350 MAP1SQ66K74 1059 aaPredicted RBP24.7■■□□□ 1.54
VPS13B-204ENST00000441350 CLEC10AQ8IUN9 316 aa24.7■■□□□ 1.54
VPS13B-204ENST00000441350 ZNF654Q8IZM8 581 aa24.7■■□□□ 1.54
VPS13B-204ENST00000441350 TMEM47Q9BQJ4 181 aa24.7■■□□□ 1.54
VPS13B-204ENST00000441350 ZBTB21Q9ULJ3 1066 aa24.7■■□□□ 1.54
VPS13B-204ENST00000441350 CTNND1O60716 968 aaKnown RBP24.69■■□□□ 1.54
VPS13B-204ENST00000441350 RCAN1P53805 252 aa24.69■■□□□ 1.54
VPS13B-204ENST00000441350 ST3GAL1Q11201 340 aa24.69■■□□□ 1.54
VPS13B-204ENST00000441350 NECAB1Q8N987 351 aa24.69■■□□□ 1.54
VPS13B-204ENST00000441350 ATAD5Q96QE3 1844 aa24.69■■□□□ 1.54
VPS13B-204ENST00000441350 GOLGA8BA8MQT2 603 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 TTLL1O95922 423 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 TOP1P11387 765 aaKnown RBP24.68■■□□□ 1.54
VPS13B-204ENST00000441350 STK3Q13188 491 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 SIAH1Q8IUQ4 282 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 GTF3C6Q969F1 213 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 KLRG1Q96E93 195 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 SLKQ9H2G2 1235 aaPredicted RBP24.68■■□□□ 1.54
VPS13B-204ENST00000441350 GINM1Q9NU53 330 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 NYAP2Q9P242 653 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 NID2Q14112 1375 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 ZBTB43O43298 467 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 USP2O75604 605 aaPredicted RBP24.68■■□□□ 1.54
VPS13B-204ENST00000441350 ASNSP08243 561 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 SYNE3Q6ZMZ3 975 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 KAT14Q9H8E8 782 aa24.68■■□□□ 1.54
VPS13B-204ENST00000441350 DAXXQ9UER7 740 aaPredicted RBP24.68■■□□□ 1.54
VPS13B-204ENST00000441350 NAP1L2Q9ULW6 460 aaPredicted RBP24.68■■□□□ 1.54
VPS13B-204ENST00000441350 SCRN1Q12765 414 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 TROAPQ12815 778 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 RAB3GAP1Q15042 981 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 CATIPQ7Z7H3 387 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 PNMA1Q8ND90 353 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 MKL1Q969V6 931 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 MYL10Q9BUA6 226 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 CLIP2Q9UDT6 1046 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 FZD1Q9UP38 647 aa24.67■■□□□ 1.54
VPS13B-204ENST00000441350 MYH4Q9Y623 1939 aa24.66■■□□□ 1.54
VPS13B-204ENST00000441350 DDAH1O94760 285 aa24.66■■□□□ 1.54
VPS13B-204ENST00000441350 EEF2P13639 858 aaKnown RBP24.66■■□□□ 1.54
VPS13B-204ENST00000441350 INPP5BP32019 993 aa24.66■■□□□ 1.54
VPS13B-204ENST00000441350 ICA1Q05084 483 aa24.66■■□□□ 1.54
VPS13B-204ENST00000441350 MICU3Q86XE3 530 aa24.66■■□□□ 1.54
VPS13B-204ENST00000441350 RAB11FIP4Q86YS3 637 aa24.66■■□□□ 1.54
VPS13B-204ENST00000441350 WRNIP1Q96S55 665 aa24.66■■□□□ 1.54
VPS13B-204ENST00000441350 PAPPA2Q9BXP8 1791 aa24.66■■□□□ 1.54
VPS13B-204ENST00000441350 DOCK1Q14185 1865 aa24.65■■□□□ 1.54
VPS13B-204ENST00000441350 PPP1R12BO60237 982 aaPredicted RBP24.65■■□□□ 1.54
VPS13B-204ENST00000441350 NF2P35240 595 aa24.65■■□□□ 1.54
VPS13B-204ENST00000441350 CCDC83Q8IWF9 413 aa24.65■■□□□ 1.54
VPS13B-204ENST00000441350 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.65■■□□□ 1.54
VPS13B-204ENST00000441350 INTS4Q96HW7 963 aaKnown RBP24.65■■□□□ 1.54
VPS13B-204ENST00000441350 RXRAP19793 462 aa24.64■■□□□ 1.54
VPS13B-204ENST00000441350 METAP2P50579 478 aaKnown RBP eCLIP24.64■■□□□ 1.54
VPS13B-204ENST00000441350 CCT2P78371 535 aaKnown RBP24.64■■□□□ 1.54
VPS13B-204ENST00000441350 NCOA5Q9HCD5 579 aaKnown RBP24.64■■□□□ 1.54
VPS13B-204ENST00000441350 FAM217BQ9NTX9 383 aaPredicted RBP24.64■■□□□ 1.54
VPS13B-204ENST00000441350 TRAF5O00463 557 aa24.64■■□□□ 1.53
VPS13B-204ENST00000441350 CALM1P0DP23 149 aa24.64■■□□□ 1.53
VPS13B-204ENST00000441350 CALM2P0DP24 149 aa24.64■■□□□ 1.53
VPS13B-204ENST00000441350 CALM3P0DP25 149 aa24.64■■□□□ 1.53
VPS13B-204ENST00000441350 SCYL3Q8IZE3 742 aa24.64■■□□□ 1.53
VPS13B-204ENST00000441350 GOLGA8AA7E2F4 631 aa24.63■■□□□ 1.53
VPS13B-204ENST00000441350 PRKG1Q13976 671 aa24.63■■□□□ 1.53
VPS13B-204ENST00000441350 NOL9Q5SY16 702 aaKnown RBP24.63■■□□□ 1.53
VPS13B-204ENST00000441350 FANCBQ8NB91 859 aa24.63■■□□□ 1.53
VPS13B-204ENST00000441350 NUP133Q8WUM0 1156 aa24.63■■□□□ 1.53
VPS13B-204ENST00000441350 ZKSCAN4Q969J2 545 aaPredicted RBP24.63■■□□□ 1.53
VPS13B-204ENST00000441350 MAP3K14Q99558 947 aa24.63■■□□□ 1.53
VPS13B-204ENST00000441350 GPBP1L1Q9HC44 474 aaPredicted RBP24.63■■□□□ 1.53
VPS13B-204ENST00000441350 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.63■■□□□ 1.53
VPS13B-204ENST00000441350 SYNPO2Q9UMS6 1093 aa24.63■■□□□ 1.53
VPS13B-204ENST00000441350 HSP90AA1P07900 732 aaKnown RBP24.62■■□□□ 1.53
VPS13B-204ENST00000441350 ATP2B2Q01814 1243 aa24.62■■□□□ 1.53
VPS13B-204ENST00000441350 PPP2R5BQ15173 497 aa24.62■■□□□ 1.53
VPS13B-204ENST00000441350 MAP3K11Q16584 847 aa24.62■■□□□ 1.53
VPS13B-204ENST00000441350 CHADLQ6NUI6 762 aa24.62■■□□□ 1.53
VPS13B-204ENST00000441350 LRRC47Q8N1G4 583 aaKnown RBP24.62■■□□□ 1.53
VPS13B-204ENST00000441350 CHMP4CQ96CF2 233 aa24.62■■□□□ 1.53
VPS13B-204ENST00000441350 CDC27P30260 824 aa24.61■■□□□ 1.53
VPS13B-204ENST00000441350 MAP3K9P80192 1104 aa24.61■■□□□ 1.53
VPS13B-204ENST00000441350 CCDC144CPQ8IYA2 1237 aa24.61■■□□□ 1.53
VPS13B-204ENST00000441350 SPRYD3Q8NCJ5 442 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms