RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 AXIN2Q9Y2T1 843 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 MAP3K15Q6ZN16 1313 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 DDB1Q16531 1140 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 ZSCAN26Q16670 478 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 DHX40Q8IX18 779 aaKnown RBP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 AFAP1L1Q8TED9 768 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 RPGRQ92834 1020 aaKnown RBP7.51□□□□□ -1.21
CSDE1-205ENST00000438362 GSDMAQ96QA5 445 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 SETDB2Q96T68 719 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 CSRNP2Q9H175 543 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 CDC23Q9UJX2 597 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 MAN1B1Q9UKM7 699 aa7.51□□□□□ -1.21
CSDE1-205ENST00000438362 GOLGA6L7A0A1B0GV03 622 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 CYP27B1O15528 508 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 LIFRP42702 1097 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 EXOSC10Q01780 885 aaKnown RBP7.5□□□□□ -1.21
CSDE1-205ENST00000438362 RABL6Q3YEC7 729 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-205ENST00000438362 CEMIPQ8WUJ3 1361 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 TECPR2O15040 1411 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 KCNJ18B7U540 433 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 C6orf229H3BNL8 230 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 MMP1P03956 469 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 MORC3Q14149 939 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 KCNJ12Q14500 433 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 SV2BQ7L1I2 683 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 SRGAP1Q7Z6B7 1085 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 SDR42E1Q8WUS8 393 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 SYMPKQ92797 1274 aaKnown RBP7.5□□□□□ -1.21
CSDE1-205ENST00000438362 RNF26Q9BY78 433 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-205ENST00000438362 BTG4Q9NY30 223 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 SEC31AO94979 1220 aaKnown RBP7.5□□□□□ -1.21
CSDE1-205ENST00000438362 BCAMP50895 628 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 ARID5AQ03989 594 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 NR5A1Q13285 461 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 TERF2Q15554 542 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 KMT5BQ4FZB7 885 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 CNNM4Q6P4Q7 775 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 ZSCAN10Q96SZ4 725 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-205ENST00000438362 ANKRD2Q9GZV1 360 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 ZSWIM5Q9P217 1185 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 JAG2Q9Y219 1238 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 SAR1BQ9Y6B6 198 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 ZNF609O15014 1411 aa7.5□□□□□ -1.21
CSDE1-205ENST00000438362 USP17L12C9JPN9 530 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 USP17L21D6R901 530 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 GTPBP6O43824 516 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 LDHBP07195 334 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 PNMA6AP0CW24 399 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CASP14P31944 242 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 PTGDRQ13258 359 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 PRPF4BQ13523 1007 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 MB21D2Q8IYB1 491 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 GRAMD1CQ8IYS0 662 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 ANKRD7Q92527 254 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 SECISBP2LQ93073 1101 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 RPGRIP1Q96KN7 1286 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 SELENOOQ9BVL4 669 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 HAUS4Q9H6D7 363 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 SAMSN1Q9NSI8 373 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 H7C1D1 291 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CHGBP05060 677 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 SLFN14P0C7P3 912 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 HIBADHP31937 336 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 TNNI2P48788 182 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 DNAJC21Q5F1R6 531 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 MEX3CQ5U5Q3 659 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 RESP18Q5W5W9 173 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 AATFQ9NY61 560 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 KIF20BQ96Q89 1820 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CCDC151A5D8V7 595 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CTIFO43310 598 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 LONRF2Q1L5Z9 754 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CFAP58Q5T655 872 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 MICALL1Q8N3F8 863 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 ATRIPQ8WXE1 791 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 NYXQ9GZU5 481 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CCDC113Q9H0I3 377 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 GOPCQ9HD26 462 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 EPN1Q9Y6I3 576 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 PREX1Q8TCU6 1659 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 ARID4AP29374 1257 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 MNAT1P51948 309 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CCZ1BP86790 482 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CCZ1P86791 482 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 TPTE2Q6XPS3 522 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 SLC35F6Q8N357 371 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 ERMNQ8TAM6 284 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 IFT81Q8WYA0 676 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 CCDC87Q9NVE4 849 aa7.49□□□□□ -1.21
CSDE1-205ENST00000438362 SRPRBQ9Y5M8 271 aaKnown RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 MORC2Q9Y6X9 1032 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-205ENST00000438362 WDR19Q8NEZ3 1342 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 PALLDQ8WX93 1383 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 ADAMTS13Q76LX8 1427 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 TMEM131LA2VDJ0 1609 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 TRAF5O00463 557 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 PARP1P09874 1014 aaKnown RBP7.48□□□□□ -1.21
CSDE1-205ENST00000438362 MCAMP43121 646 aa7.48□□□□□ -1.21
CSDE1-205ENST00000438362 MAGEA1P43355 309 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1915.8 ms