RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.26■□□□□ 0.35
LINC01088-201ENST00000437737 MYH1P12882 1939 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L15C9J2P7 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L13C9JLJ4 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L11C9JVI0 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L18D6R9N7 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L22D6RA61 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L17D6RBQ6 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L19D6RCP7 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L20D6RJB6 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 CNMDO75829 334 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 UQCRFS1P1P0C7P4 283 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 FOSL2P15408 326 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 CYP2C19P33261 490 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 USP17L24Q0WX57 530 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 GJC2Q5T442 439 aaPredicted RBP17.25■□□□□ 0.35
LINC01088-201ENST00000437737 ATF7IPQ6VMQ6 1270 aa17.25■□□□□ 0.35
LINC01088-201ENST00000437737 METTL16Q86W50 562 aaKnown RBP17.25■□□□□ 0.35
LINC01088-201ENST00000437737 SAP30BPQ9UHR5 308 aaKnown RBP17.25■□□□□ 0.35
LINC01088-201ENST00000437737 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
LINC01088-201ENST00000437737 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
LINC01088-201ENST00000437737 GH2P01242 217 aa17.24■□□□□ 0.35
LINC01088-201ENST00000437737 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
LINC01088-201ENST00000437737 ARRDC4Q8NCT1 418 aa17.24■□□□□ 0.35
LINC01088-201ENST00000437737 NPLOC4Q8TAT6 608 aa17.24■□□□□ 0.35
LINC01088-201ENST00000437737 SYMPKQ92797 1274 aaKnown RBP17.24■□□□□ 0.35
LINC01088-201ENST00000437737 C12orf42Q96LP6 360 aa17.24■□□□□ 0.35
LINC01088-201ENST00000437737 DNAH12Q6ZR08 3092 aa17.24■□□□□ 0.35
LINC01088-201ENST00000437737 HOXC6P09630 235 aa17.23■□□□□ 0.35
LINC01088-201ENST00000437737 PPP4CP60510 307 aa17.23■□□□□ 0.35
LINC01088-201ENST00000437737 SMAD3P84022 425 aaKnown RBP17.23■□□□□ 0.35
LINC01088-201ENST00000437737 SLFN5Q08AF3 891 aa17.23■□□□□ 0.35
LINC01088-201ENST00000437737 GRB14Q14449 540 aa17.23■□□□□ 0.35
LINC01088-201ENST00000437737 SLC39A5Q6ZMH5 540 aa17.23■□□□□ 0.35
LINC01088-201ENST00000437737 TRPV1Q8NER1 839 aa17.23■□□□□ 0.35
LINC01088-201ENST00000437737 BADQ92934 168 aa17.23■□□□□ 0.35
LINC01088-201ENST00000437737 TTYH1Q9H313 450 aaPredicted RBP17.23■□□□□ 0.35
LINC01088-201ENST00000437737 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
LINC01088-201ENST00000437737 LAMA2P24043 3122 aaKnown RBP17.23■□□□□ 0.35
LINC01088-201ENST00000437737 GNAI3P08754 354 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 CYBAP13498 195 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 USP14P54578 494 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 TRIM60Q495X7 471 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 CATSPERGQ6ZRH7 1159 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 ADGRA1Q86SQ6 560 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 DPP9Q86TI2 863 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 VCANP13611 3396 aa17.22■□□□□ 0.35
LINC01088-201ENST00000437737 EYSQ5T1H1 3165 aa17.21■□□□□ 0.35
LINC01088-201ENST00000437737 VCAM1P19320 739 aa17.21■□□□□ 0.35
LINC01088-201ENST00000437737 G3BP1Q13283 466 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC01088-201ENST00000437737 MTX1Q13505 466 aa17.21■□□□□ 0.35
LINC01088-201ENST00000437737 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
LINC01088-201ENST00000437737 TTC39AQ5SRH9 613 aa17.21■□□□□ 0.35
LINC01088-201ENST00000437737 BTBD7Q9P203 1132 aa17.21■□□□□ 0.35
LINC01088-201ENST00000437737 ZNF236Q9UL36 1845 aa17.2■□□□□ 0.34
LINC01088-201ENST00000437737 PDLIM7Q9NR12 457 aa17.2■□□□□ 0.34
LINC01088-201ENST00000437737 SPDYE16A6NNV3 312 aaPredicted RBP17.19■□□□□ 0.34
LINC01088-201ENST00000437737 CCDC158Q5M9N0 1113 aa17.19■□□□□ 0.34
LINC01088-201ENST00000437737 LBX2Q6XYB7 198 aa17.19■□□□□ 0.34
LINC01088-201ENST00000437737 FERMT2Q96AC1 680 aa17.19■□□□□ 0.34
LINC01088-201ENST00000437737 KIAA1683Q9H0B3 1180 aa17.19■□□□□ 0.34
LINC01088-201ENST00000437737 RPAP3Q9H6T3 665 aaPredicted RBP17.19■□□□□ 0.34
LINC01088-201ENST00000437737 SPTBN5Q9NRC6 3674 aaKnown RBP17.18■□□□□ 0.34
LINC01088-201ENST00000437737 SEPT4O43236 478 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 ADORA2AP29274 412 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 ADCYAP1R1P41586 468 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 USP5P45974 858 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
LINC01088-201ENST00000437737 SNX17Q15036 470 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 OLFML2BQ68BL8 750 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 TATDN1Q6P1N9 297 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 SH3RF1Q7Z6J0 888 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 ACER1Q8TDN7 264 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 RNPC3Q96LT9 517 aaKnown RBP17.18■□□□□ 0.34
LINC01088-201ENST00000437737 CABP5Q9NP86 173 aa17.18■□□□□ 0.34
LINC01088-201ENST00000437737 TMEM265A0A087WTH1 108 aa17.17■□□□□ 0.34
LINC01088-201ENST00000437737 TRIM43BA6NCK2 446 aa17.17■□□□□ 0.34
LINC01088-201ENST00000437737 CYP2E1P05181 493 aaPredicted RBP17.17■□□□□ 0.34
LINC01088-201ENST00000437737 ABCB5Q2M3G0 1257 aa17.17■□□□□ 0.34
LINC01088-201ENST00000437737 CERKLQ49MI3 558 aaPredicted RBP17.17■□□□□ 0.34
LINC01088-201ENST00000437737 TRIM43Q96BQ3 446 aaPredicted RBP17.17■□□□□ 0.34
LINC01088-201ENST00000437737 SERPINB13Q9UIV8 391 aa17.17■□□□□ 0.34
LINC01088-201ENST00000437737 CYP7A1P22680 504 aa17.16■□□□□ 0.34
LINC01088-201ENST00000437737 TJAP1Q5JTD0 557 aa17.16■□□□□ 0.34
LINC01088-201ENST00000437737 DBNDD2Q9BQY9 259 aa17.16■□□□□ 0.34
LINC01088-201ENST00000437737 MOV10L1Q9BXT6 1211 aaKnown RBP17.16■□□□□ 0.34
LINC01088-201ENST00000437737 SLC5A4Q9NY91 659 aa17.16■□□□□ 0.34
LINC01088-201ENST00000437737 PNMA6EA0A0J9YXQ4 647 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 STRNO43815 780 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 IGHA2P01877 340 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
LINC01088-201ENST00000437737 COL9A1P20849 921 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 ZAP70P43403 619 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 TLE2Q04725 743 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 LRRC41Q15345 812 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 TTC6Q86TZ1 520 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 MIGA1Q8NAN2 632 aa17.15■□□□□ 0.34
LINC01088-201ENST00000437737 EHD4Q9H223 541 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms