RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 CABP4P57796 275 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
SCAF4-203ENST00000434667 EXOC4Q96A65 974 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 EIF3CQ99613 913 aaKnown RBP11.88□□□□□ -0.51
SCAF4-203ENST00000434667 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
SCAF4-203ENST00000434667 CDC23Q9UJX2 597 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 SH2B2O14492 632 aaPredicted RBP11.88□□□□□ -0.51
SCAF4-203ENST00000434667 GYPCP04921 128 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 MYBL2P10244 700 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 NTRK3Q16288 839 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 CCDC57Q2TAC2 916 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 PLIN2Q99541 437 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 CTNND2Q9UQB3 1225 aa11.88□□□□□ -0.51
SCAF4-203ENST00000434667 TPM1P09493 284 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 HDXQ7Z353 690 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 SMARCAL1Q9NZC9 954 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 VPS54Q9P1Q0 977 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 FBXO2Q9UK22 296 aaPredicted RBP11.87□□□□□ -0.51
SCAF4-203ENST00000434667 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 SLIT2O94813 1529 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 ZMYM6O95789 1325 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 H7C1W4 665 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 ATP2C2O75185 946 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 NOSTRINQ8IVI9 506 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
SCAF4-203ENST00000434667 JMYQ8N9B5 988 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 SHISA4Q96DD7 197 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 FAM170AA1A519 330 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 ADAMTS3O15072 1205 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 APTXQ7Z2E3 356 aaKnown RBP11.87□□□□□ -0.51
SCAF4-203ENST00000434667 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
SCAF4-203ENST00000434667 NUP88Q99567 741 aaPredicted RBP11.87□□□□□ -0.51
SCAF4-203ENST00000434667 ZNF532Q9HCE3 1301 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 PPP6R2O75170 966 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 PPARAQ07869 468 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 MORC3Q14149 939 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 ZNF174Q15697 407 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 KCNH5Q8NCM2 988 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 PLBD2Q8NHP8 589 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 APPBP2Q92624 585 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 DEF6Q9H4E7 631 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 ARMT1Q9H993 441 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 DUSP10Q9Y6W6 482 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
SCAF4-203ENST00000434667 RNF40O75150 1001 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 LY9Q9HBG7 655 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 SLC12A7Q9Y666 1083 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 LOC102724159A0A0B4J2E5 919 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
SCAF4-203ENST00000434667 IGDCC4Q8TDY8 1250 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 MMS19Q96T76 1030 aa11.86□□□□□ -0.51
SCAF4-203ENST00000434667 HOOK1Q9UJC3 728 aaKnown RBP11.86□□□□□ -0.51
SCAF4-203ENST00000434667 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
SCAF4-203ENST00000434667 PHKA1P46020 1223 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 MNAT1P51948 309 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 SSRP1Q08945 709 aaKnown RBP11.85□□□□□ -0.51
SCAF4-203ENST00000434667 METTL24Q5JXM2 366 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 NUTM2AQ8IVF1 878 aaPredicted RBP11.85□□□□□ -0.51
SCAF4-203ENST00000434667 CTAGE15A4D2H0 777 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 TRIM49BA6NDI0 452 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 CTAGE8P0CG41 777 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 LIG3P49916 1009 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 EVX2Q03828 476 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 EZH2Q15910 746 aaKnown RBP11.85□□□□□ -0.51
SCAF4-203ENST00000434667 CTAGE6Q86UF2 777 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 CTAGE4Q8IX94 777 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 N4BP3O15049 544 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 MFAP3LO75121 409 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 TATP17735 454 aaPredicted RBP11.85□□□□□ -0.51
SCAF4-203ENST00000434667 SLC20A2Q08357 652 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 ENOX2Q16206 610 aaKnown RBP11.85□□□□□ -0.51
SCAF4-203ENST00000434667 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
SCAF4-203ENST00000434667 MICALL1Q8N3F8 863 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
SCAF4-203ENST00000434667 EHD2Q9NZN4 543 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
SCAF4-203ENST00000434667 A0A1B0GTH6 734 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 NKRFO15226 690 aaKnown RBP eCLIP11.84□□□□□ -0.51
SCAF4-203ENST00000434667 ATP1A1P05023 1023 aaKnown RBP11.84□□□□□ -0.51
SCAF4-203ENST00000434667 BRD3Q15059 726 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 ENOX1Q8TC92 643 aaKnown RBP11.84□□□□□ -0.51
SCAF4-203ENST00000434667 PLCD4Q9BRC7 762 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 EPB41L4AQ9HCS5 686 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-203ENST00000434667 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 ZPR1O75312 459 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 VEGFAP15692 232 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-203ENST00000434667 ARHGAP25P42331 645 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 KLK7P49862 253 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 FCHSD1Q86WN1 690 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 SYMPKQ92797 1274 aaKnown RBP11.84□□□□□ -0.51
SCAF4-203ENST00000434667 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 CYP2D7A0A087X1C5 515 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 KDM4FA0A1W2PPD8 638 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 ADD3Q9UEY8 706 aaKnown RBP11.84□□□□□ -0.51
SCAF4-203ENST00000434667 GDAQ9Y2T3 454 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 CHD4Q14839 1912 aa11.84□□□□□ -0.51
SCAF4-203ENST00000434667 SYF2O95926 243 aaKnown RBP11.83□□□□□ -0.52
SCAF4-203ENST00000434667 PLCD1P51178 756 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms