RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 EFCAB5A4FU69 1503 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
SEC16A-206ENST00000431893 ANKFY1Q9P2R3 1169 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 MAGED2Q9UNF1 606 aaPredicted RBP12.65□□□□□ -0.38
SEC16A-206ENST00000431893 KCTD16Q68DU8 428 aa12.65□□□□□ -0.39
SEC16A-206ENST00000431893 SCYL2Q6P3W7 929 aa12.65□□□□□ -0.39
SEC16A-206ENST00000431893 INTS4Q96HW7 963 aaKnown RBP12.65□□□□□ -0.39
SEC16A-206ENST00000431893 SLC8A3P57103 927 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 NAA35Q5VZE5 725 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 NOP9Q86U38 636 aaKnown RBP12.64□□□□□ -0.39
SEC16A-206ENST00000431893 ARHGAP24Q8N264 748 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 SPDL1Q96EA4 605 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 FAM89AQ96GI7 184 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
SEC16A-206ENST00000431893 ZNF408Q9H9D4 720 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 TFCP2L1Q9NZI6 479 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 VPS54Q9P1Q0 977 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 SERPINB6P35237 376 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 CYP2J2P51589 502 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 PDZD8Q8NEN9 1154 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 PTPN22Q9Y2R2 807 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 SNAPC4Q5SXM2 1469 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 PPIP5K1Q6PFW1 1433 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 ANKRD36BQ8N2N9 1353 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 EXOC3O60645 756 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 TCP10Q12799 353 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 RILPL1Q5EBL4 403 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 CABP7Q86V35 215 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 RSAD2Q8WXG1 361 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 HELLSQ9NRZ9 838 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 IFNB1P01574 187 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 FAM47AQ5JRC9 791 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 IDI1Q13907 227 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 CALCRLQ16602 461 aa12.64□□□□□ -0.39
SEC16A-206ENST00000431893 RPS6KA2Q15349 733 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 CHAMP1Q96JM3 812 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 TRAF1Q13077 416 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 DDX17Q92841 729 aaKnown RBP12.63□□□□□ -0.39
SEC16A-206ENST00000431893 ASXL1Q8IXJ9 1541 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
SEC16A-206ENST00000431893 GABPB1Q06547 395 aaPredicted RBP12.63□□□□□ -0.39
SEC16A-206ENST00000431893 ITKQ08881 620 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 WHAMMP3Q1A5X7 153 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 AKAP4Q5JQC9 854 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 C4orf50Q6ZRC1 276 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 RAB3IPQ96QF0 476 aaPredicted RBP12.63□□□□□ -0.39
SEC16A-206ENST00000431893 ST7Q9NRC1 585 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 PCDHB13Q9Y5F0 798 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 TUBBP07437 444 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 CPXCR1Q8N123 301 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 SYNJ2BP-COX16A0A087WUM0 186 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 KRIT1O00522 736 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 CUTAO60888 179 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 ADCY8P40145 1251 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 COX16Q9P0S2 106 aa12.63□□□□□ -0.39
SEC16A-206ENST00000431893 SLC12A2P55011 1212 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 RBBP5Q15291 538 aaKnown RBP12.62□□□□□ -0.39
SEC16A-206ENST00000431893 DBNDD2Q9BQY9 259 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 ZBTB40Q9NUA8 1239 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
SEC16A-206ENST00000431893 ZMYND10O75800 440 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 PRPF6O94906 941 aaKnown RBP12.62□□□□□ -0.39
SEC16A-206ENST00000431893 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 STAG1Q8WVM7 1258 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 NUP58Q9BVL2 599 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 ANLNQ9NQW6 1124 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
SEC16A-206ENST00000431893 ATF7P17544 494 aaPredicted RBP12.62□□□□□ -0.39
SEC16A-206ENST00000431893 ITGA6P23229 1130 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 KRT81Q14533 505 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 E2F5Q15329 346 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 TPH2Q8IWU9 490 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 BANK1Q8NDB2 785 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 CAPS2Q9BXY5 557 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 LRWD1Q9UFC0 647 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 SOS1Q07889 1333 aaPredicted RBP12.62□□□□□ -0.39
SEC16A-206ENST00000431893 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 VAMP4O75379 141 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
SEC16A-206ENST00000431893 CFAP61Q8NHU2 1237 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 XAGE2Q96GT9 111 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 SMYD2Q9NRG4 433 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 NSD2O96028 1365 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 ABL1P00519 1130 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 RASSF2P50749 326 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 MTMR3Q13615 1198 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 PHACTR3Q96KR7 559 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 SBNO1A3KN83 1393 aa12.62□□□□□ -0.39
SEC16A-206ENST00000431893 RCN2Q14257 317 aa12.61□□□□□ -0.39
SEC16A-206ENST00000431893 POMGNT1Q8WZA1 660 aa12.61□□□□□ -0.39
SEC16A-206ENST00000431893 IMPACTQ9P2X3 320 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms