RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 UBN2Q6ZU65 1347 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 MAGEB6P1A0A0J9YX57 407 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 KIF5CO60282 957 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 MARCH6O60337 910 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 TNNT3P45378 269 aaPredicted RBP9.15□□□□□ -0.94
HPS4-205ENST00000429411 DNA2P51530 1060 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 AXDND1Q5T1B0 1012 aaPredicted RBP9.15□□□□□ -0.94
HPS4-205ENST00000429411 CCDC102AQ96A19 550 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 STRBPQ96SI9 672 aaKnown RBP9.15□□□□□ -0.94
HPS4-205ENST00000429411 RNF41Q9H4P4 317 aaPredicted RBP9.15□□□□□ -0.94
HPS4-205ENST00000429411 CNNM2Q9H8M5 875 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 SMIM22K7EJ46 135 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 CRKLP46109 303 aaKnown RBP9.15□□□□□ -0.94
HPS4-205ENST00000429411 MTF1Q14872 753 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 PIK3AP1Q6ZUJ8 805 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 LRP10Q7Z4F1 713 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 METTL16Q86W50 562 aaKnown RBP9.15□□□□□ -0.94
HPS4-205ENST00000429411 CTNND2Q9UQB3 1225 aa9.15□□□□□ -0.94
HPS4-205ENST00000429411 TNKSO95271 1327 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 IPO7O95373 1038 aaKnown RBP9.15□□□□□ -0.95
HPS4-205ENST00000429411 CLCN6P51797 869 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 DYNLL1P63167 89 aaKnown RBP9.15□□□□□ -0.95
HPS4-205ENST00000429411 PPP2R3AQ06190 1150 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 CAVIN4Q5BKX8 364 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 RILPL1Q5EBL4 403 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 ARMCX6Q7L4S7 300 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 FANCBQ8NB91 859 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 CAGE1Q8TC20 777 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 ISCA1Q9BUE6 129 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 MAN1B1Q9UKM7 699 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 STX8Q9UNK0 236 aa9.15□□□□□ -0.95
HPS4-205ENST00000429411 CCDC66A2RUB6 948 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 DEXIO95424 95 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 GYS2P54840 703 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 LINC00116Q8NCU8 138 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 UIMC1Q96RL1 719 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 LY9Q9HBG7 655 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 ZCCHC17Q9NP64 241 aaKnown RBP9.14□□□□□ -0.95
HPS4-205ENST00000429411 DDX41Q9UJV9 622 aaKnown RBP9.14□□□□□ -0.95
HPS4-205ENST00000429411 SOWAHDA6NJG2 315 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 MMP10P09238 476 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 TXLNAP40222 546 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 EIF5P55010 431 aaKnown RBP9.14□□□□□ -0.95
HPS4-205ENST00000429411 NAP1L1P55209 391 aaKnown RBP9.14□□□□□ -0.95
HPS4-205ENST00000429411 CCDC152Q4G0S7 254 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 SPECC1LQ69YQ0 1117 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 TOGARAM2Q6ZUX3 1019 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 AMIGO3Q86WK7 504 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 AATFQ9NY61 560 aaKnown RBP eCLIP9.14□□□□□ -0.95
HPS4-205ENST00000429411 TAB2Q9NYJ8 693 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 RIPOR2Q9Y4F9 1068 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 STK24Q9Y6E0 443 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 ARHGAP6O43182 974 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 CCDC175P0C221 793 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 LMAN1P49257 510 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 FMR1Q06787 632 aaKnown RBP eCLIP9.14□□□□□ -0.95
HPS4-205ENST00000429411 PPARAQ07869 468 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 UBE3CQ15386 1083 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 ENOX2Q16206 610 aaKnown RBP9.14□□□□□ -0.95
HPS4-205ENST00000429411 COL23A1Q86Y22 540 aaPredicted RBP9.14□□□□□ -0.95
HPS4-205ENST00000429411 DRC1Q96MC2 740 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 GDAP1L1Q96MZ0 367 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 GUCA1BQ9UMX6 200 aa9.14□□□□□ -0.95
HPS4-205ENST00000429411 USP17L12C9JPN9 530 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 AKR1B15C9JRZ8 316 aaPredicted RBP9.13□□□□□ -0.95
HPS4-205ENST00000429411 USP17L21D6R901 530 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 KRT2P35908 639 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 FKBP15Q5T1M5 1219 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 NYAP1Q6ZVC0 841 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 NEK11Q8NG66 645 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 RASGRP4Q8TDF6 673 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 CAPZA3Q96KX2 299 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 OSBPL5Q9H0X9 879 aaPredicted RBP9.13□□□□□ -0.95
HPS4-205ENST00000429411 ARFGAP3Q9NP61 516 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 TEX33O43247 280 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 PLEKHA8P1O95397 391 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 USP5P45974 858 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 ATP2B2Q01814 1243 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 GPS2Q13227 327 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 HSP90B2PQ58FF3 399 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 JAKMIP3Q5VZ66 844 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 FOXP4Q8IVH2 680 aaPredicted RBP9.13□□□□□ -0.95
HPS4-205ENST00000429411 SYMPKQ92797 1274 aaKnown RBP9.13□□□□□ -0.95
HPS4-205ENST00000429411 WDR24Q96S15 920 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 EPB41L4AQ9HCS5 686 aaPredicted RBP9.13□□□□□ -0.95
HPS4-205ENST00000429411 BCS1LQ9Y276 419 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 SYNRGQ9UMZ2 1314 aa9.13□□□□□ -0.95
HPS4-205ENST00000429411 WTIPA6NIX2 430 aaPredicted RBP9.12□□□□□ -0.95
HPS4-205ENST00000429411 NMT2O60551 498 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 KIF20AO95235 890 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 MMP1P03956 469 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 SUSD4Q5VX71 490 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 VSTM4Q8IW00 320 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 EXOC8Q8IYI6 725 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 AGXT2Q9BYV1 514 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 MAGEC2Q9UBF1 373 aaPredicted RBP9.12□□□□□ -0.95
HPS4-205ENST00000429411 SALL1Q9NSC2 1324 aa9.12□□□□□ -0.95
HPS4-205ENST00000429411 GLI3P10071 1580 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms