RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
GPC1-204ENST00000426280 ZMYM1Q5SVZ6 1142 aa15.32■□□□□ 0.04
GPC1-204ENST00000426280 USP17L2Q6R6M4 530 aa15.32■□□□□ 0.04
GPC1-204ENST00000426280 ZNF333Q96JL9 665 aa15.32■□□□□ 0.04
GPC1-204ENST00000426280 TMOD4Q9NZQ9 345 aa15.32■□□□□ 0.04
GPC1-204ENST00000426280 ERC2O15083 957 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 CNMDO75829 334 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 EN2P19622 333 aaPredicted RBP15.31■□□□□ 0.04
GPC1-204ENST00000426280 MLLT1Q03111 559 aaPredicted RBP15.31■□□□□ 0.04
GPC1-204ENST00000426280 AAMPQ13685 434 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 MTFR1Q15390 333 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 C16orf86Q6ZW13 317 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 C12orf42Q96LP6 360 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 FSD1Q9BTV5 496 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 KIAA1683Q9H0B3 1180 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 RWDD1Q9H446 243 aaPredicted RBP15.31■□□□□ 0.04
GPC1-204ENST00000426280 CABP5Q9NP86 173 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 TACC3Q9Y6A5 838 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 MYPNQ86TC9 1320 aa15.31■□□□□ 0.04
GPC1-204ENST00000426280 MINDY4BA8MYZ0 360 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 FLT3LGP49771 235 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 FCGRTP55899 365 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 HERVK_113P62684 666 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 NUCB1Q02818 461 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 SBK1Q52WX2 424 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 VPS53Q5VIR6 699 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 CHD1LQ86WJ1 897 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 PLEKHM2Q8IWE5 1019 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 INCENPQ9NQS7 918 aa15.3■□□□□ 0.04
GPC1-204ENST00000426280 PATL2C9JE40 543 aaKnown RBP15.29■□□□□ 0.04
GPC1-204ENST00000426280 GNRH1P01148 92 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
GPC1-204ENST00000426280 VCAM1P19320 739 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 RASA1P20936 1047 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 ARHGEF6Q15052 776 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 FAM110CQ1W6H9 321 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 SLC9C1Q4G0N8 1177 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 CATSPERGQ6ZRH7 1159 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 IFNL3Q8IZI9 196 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 MORF4L1Q9UBU8 362 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 SWAP70Q9UH65 585 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 GJD2Q9UKL4 321 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 PNMA3Q9UL41 463 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 MGAMO43451 1857 aa15.29■□□□□ 0.04
GPC1-204ENST00000426280 ELNP15502 786 aa15.28■□□□□ 0.04
GPC1-204ENST00000426280 PDE4AP27815 886 aa15.28■□□□□ 0.04
GPC1-204ENST00000426280 GCLCP48506 637 aaPredicted RBP15.28■□□□□ 0.04
GPC1-204ENST00000426280 IRX3P78415 501 aaPredicted RBP15.28■□□□□ 0.04
GPC1-204ENST00000426280 FAM227BQ96M60 508 aa15.28■□□□□ 0.04
GPC1-204ENST00000426280 FEZ1Q99689 392 aa15.28■□□□□ 0.04
GPC1-204ENST00000426280 PORCNQ9H237 461 aa15.28■□□□□ 0.04
GPC1-204ENST00000426280 BTBD7Q9P203 1132 aa15.28■□□□□ 0.04
GPC1-204ENST00000426280 A0A0D9SFI3 127 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L15C9J2P7 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L13C9JLJ4 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L11C9JVI0 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L18D6R9N7 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L22D6RA61 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L17D6RBQ6 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L19D6RCP7 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L20D6RJB6 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 TNPO2O14787 897 aaKnown RBP15.27■□□□□ 0.04
GPC1-204ENST00000426280 PRDM1O75626 825 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 EEF2P13639 858 aaKnown RBP15.27■□□□□ 0.04
GPC1-204ENST00000426280 GRK4P32298 578 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 USP17L24Q0WX57 530 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 PABPC4Q13310 644 aaKnown RBP eCLIP15.27■□□□□ 0.04
GPC1-204ENST00000426280 GIMAP6Q6P9H5 292 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 TMEM179Q6ZVK1 233 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 EVI5LQ96CN4 794 aa15.27■□□□□ 0.04
GPC1-204ENST00000426280 RPAP3Q9H6T3 665 aaPredicted RBP15.27■□□□□ 0.04
GPC1-204ENST00000426280 APPP05067 770 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 HOXD10P28358 340 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 PRMT2P55345 433 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 TRIM32Q13049 653 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 SPICE1Q8N0Z3 855 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 NKX2-3Q8TAU0 364 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 RAET1EQ8TD07 263 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 PAGR1Q9BTK6 254 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 ARPP21Q9UBL0 812 aaPredicted RBP15.26■□□□□ 0.03
GPC1-204ENST00000426280 TMX2Q9Y320 296 aa15.26■□□□□ 0.03
GPC1-204ENST00000426280 TNRC18O15417 2968 aaPredicted RBP15.25■□□□□ 0.03
GPC1-204ENST00000426280 SPDYE16A6NNV3 312 aaPredicted RBP15.25■□□□□ 0.03
GPC1-204ENST00000426280 ADCY3O60266 1144 aa15.25■□□□□ 0.03
GPC1-204ENST00000426280 USP14P54578 494 aa15.25■□□□□ 0.03
GPC1-204ENST00000426280 ICA1Q05084 483 aa15.25■□□□□ 0.03
GPC1-204ENST00000426280 NMIQ13287 307 aaPredicted RBP15.25■□□□□ 0.03
GPC1-204ENST00000426280 ZNF589Q86UQ0 364 aaPredicted RBP15.25■□□□□ 0.03
GPC1-204ENST00000426280 GPRC5AQ8NFJ5 357 aa15.25■□□□□ 0.03
GPC1-204ENST00000426280 CCDC17Q96LX7 622 aa15.25■□□□□ 0.03
GPC1-204ENST00000426280 ZBTB47Q9UFB7 747 aaPredicted RBP15.25■□□□□ 0.03
GPC1-204ENST00000426280 DOCK3Q8IZD9 2030 aa15.25■□□□□ 0.03
GPC1-204ENST00000426280 CENPFP49454 3210 aa15.25■□□□□ 0.03
GPC1-204ENST00000426280 PLXNB2O15031 1838 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 IGKV6D-41A0A0C4DH26 115 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 NEFLP07196 543 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 TDO2P48775 406 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 ERVK-9P63128 1117 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 ERVK-24P63145 666 aa15.24■□□□□ 0.03
GPC1-204ENST00000426280 CTDSPL2Q05D32 466 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms