RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 FLT1P17948 1338 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 PRDM1O75626 825 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 BRD1O95696 1058 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 MAP3K9P80192 1104 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 ANKRD13AQ8IZ07 590 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 GTF3C2Q8WUA4 911 aaPredicted RBP8.37□□□□□ -1.07
LSM8-204ENST00000424702 RRP36Q96EU6 259 aaKnown RBP8.37□□□□□ -1.07
LSM8-204ENST00000424702 WRNIP1Q96S55 665 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 DEFB129Q9H1M3 183 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 ZSCAN16Q9H4T2 348 aaPredicted RBP8.37□□□□□ -1.07
LSM8-204ENST00000424702 NCOA5Q9HCD5 579 aaKnown RBP8.37□□□□□ -1.07
LSM8-204ENST00000424702 GSG1L2A8MUP6 293 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 ORC4O43929 436 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 DDAH1O94760 285 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 KCNA3P22001 575 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 CCNA1P78396 465 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 CEBPZQ03701 1054 aaKnown RBP8.37□□□□□ -1.07
LSM8-204ENST00000424702 WDR78Q5VTH9 848 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 SLC26A6Q9BXS9 759 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 WDR19Q8NEZ3 1342 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 ZNF541Q9H0D2 1346 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 LARGE1O95461 756 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 TTLL1O95922 423 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 SLC1A4P43007 532 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 CDK8P49336 464 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 STK38Q15208 465 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 GPATCH4Q5T3I0 446 aaKnown RBP8.37□□□□□ -1.07
LSM8-204ENST00000424702 CCDC73Q6ZRK6 1079 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 STAG1Q8WVM7 1258 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 TANGO6Q9C0B7 1094 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 SLC5A4Q9NY91 659 aa8.37□□□□□ -1.07
LSM8-204ENST00000424702 FDX1P10109 184 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 COPB2P35606 906 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 TOB2Q14106 344 aaPredicted RBP8.36□□□□□ -1.07
LSM8-204ENST00000424702 MCTP2Q6DN12 878 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 STOX1Q6ZVD7 989 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 FASTKD5Q7L8L6 764 aaKnown RBP8.36□□□□□ -1.07
LSM8-204ENST00000424702 FAM160B2Q86V87 743 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 TAF1DQ9H5J8 278 aaPredicted RBP8.36□□□□□ -1.07
LSM8-204ENST00000424702 YBX3P16989 372 aaKnown RBP eCLIP8.36□□□□□ -1.075e-8■□□□□ 8.5
LSM8-204ENST00000424702 RXRAP19793 462 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 PDIA3P30101 505 aaKnown RBP8.36□□□□□ -1.07
LSM8-204ENST00000424702 ASPRV1Q53RT3 343 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 C12orf60Q5U649 245 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 USP17L2Q6R6M4 530 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 PIAS4Q8N2W9 510 aaPredicted RBP8.36□□□□□ -1.07
LSM8-204ENST00000424702 ALG1Q9BT22 464 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 MXD3Q9BW11 206 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 GBA2Q9HCG7 927 aaPredicted RBP8.36□□□□□ -1.07
LSM8-204ENST00000424702 JAK2O60674 1132 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 GADL1Q6ZQY3 521 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 TBC1D10CQ8IV04 446 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 SMCR8Q8TEV9 937 aaPredicted RBP8.36□□□□□ -1.07
LSM8-204ENST00000424702 ZSCAN10Q96SZ4 725 aaPredicted RBP8.36□□□□□ -1.07
LSM8-204ENST00000424702 GDPD2Q9HCC8 539 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 TAF6LQ9Y6J9 622 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
LSM8-204ENST00000424702 SPEF2Q9C093 1822 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 CTNND1O60716 968 aaKnown RBP8.35□□□□□ -1.07
LSM8-204ENST00000424702 CALML3P27482 149 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 EPS15P42566 896 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 PKP1Q13835 747 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 RCSD1Q6JBY9 416 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 RASSF8Q8NHQ8 419 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 L3MBTL3Q96JM7 780 aaPredicted RBP8.35□□□□□ -1.07
LSM8-204ENST00000424702 PRMT6Q96LA8 375 aaPredicted RBP8.35□□□□□ -1.07
LSM8-204ENST00000424702 C19orf81C9J6K1 198 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 CELF2O95319 508 aaKnown RBP8.35□□□□□ -1.07
LSM8-204ENST00000424702 CACNB3P54284 484 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 SCRN1Q12765 414 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 SREBF2Q12772 1141 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 DGKHQ86XP1 1220 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 MB21D2Q8IYB1 491 aaPredicted RBP8.35□□□□□ -1.07
LSM8-204ENST00000424702 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 TRIM44Q96DX7 344 aaPredicted RBP8.35□□□□□ -1.07
LSM8-204ENST00000424702 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 CLIP2Q9UDT6 1046 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 TCRBV5S4A2TA0A5A2 114 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 YDJCA8MPS7 323 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 WNT10BO00744 389 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 SLFN13Q68D06 897 aa8.35□□□□□ -1.07
LSM8-204ENST00000424702 COL1A1P02452 1464 aaPredicted RBP8.35□□□□□ -1.07
LSM8-204ENST00000424702 WTIPA6NIX2 430 aaPredicted RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 DTNBO60941 627 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 ATP2B1P20020 1258 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 ME1P48163 572 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 EXOSC10Q01780 885 aaKnown RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 KLHL40Q2TBA0 621 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 DCAF4Q8WV16 495 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 CCDC102AQ96A19 550 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 NAP1L4Q99733 375 aaKnown RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 ZSWIM5Q9P217 1185 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 TFIP11Q9UBB9 837 aaKnown RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 TNKSO95271 1327 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 LETM1O95202 739 aaPredicted RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 RCAN1P53805 252 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 DNM1Q05193 864 aaKnown RBP8.34□□□□□ -1.07
LSM8-204ENST00000424702 NEDD1Q8NHV4 660 aa8.34□□□□□ -1.07
LSM8-204ENST00000424702 PIBF1Q8WXW3 757 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms