RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 PPFIA4O75335 1185 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 IDH1O75874 414 aaKnown RBP18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 TUBB4BP68371 445 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 GSPT2Q8IYD1 628 aaKnown RBP18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 ZNF579Q8NAF0 562 aaKnown RBP18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 PAGE5Q96GU1 130 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 ZKSCAN3Q9BRR0 538 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 GUCA1BQ9UMX6 200 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 STK36Q9NRP7 1315 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 FILIP1LQ4L180 1135 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 KANK3Q6NY19 840 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 TMTC1Q8IUR5 882 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 DRC1Q96MC2 740 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 CHP1Q99653 195 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 VPS16Q9H269 839 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 PIH1D3Q9NQM4 214 aaKnown RBP18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 HPCAL4Q9UM19 191 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 CTNND2Q9UQB3 1225 aa18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 REXO2Q9Y3B8 237 aaKnown RBP18.87■□□□□ 0.61
NPC1L1-203ENST00000423141 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 LAMB4A4D0S4 1761 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 IFNAR1P17181 557 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 CABP4P57796 275 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 KRT31Q15323 416 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 PPM1EQ8WY54 764 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 MMS19Q96T76 1030 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 NUP88Q99567 741 aaPredicted RBP18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 MST1RQ04912 1400 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 AARSP49588 968 aaKnown RBP eCLIP18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 CCDC148Q8NFR7 591 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 DCAF5Q96JK2 942 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 CTAGE1Q96RT6 745 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 FOXP1Q9H334 677 aaPredicted RBP18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 ACBD3Q9H3P7 528 aa18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 MYO5AQ9Y4I1 1855 aaKnown RBP18.86■□□□□ 0.61
NPC1L1-203ENST00000423141 ZNF532Q9HCE3 1301 aa18.85■□□□□ 0.61
NPC1L1-203ENST00000423141 MYH7P12883 1935 aa18.85■□□□□ 0.61
NPC1L1-203ENST00000423141 N4BP3O15049 544 aa18.85■□□□□ 0.61
NPC1L1-203ENST00000423141 USP14P54578 494 aa18.85■□□□□ 0.61
NPC1L1-203ENST00000423141 CCDC51Q96ER9 411 aa18.85■□□□□ 0.61
NPC1L1-203ENST00000423141 TRAPPC11Q7Z392 1133 aa18.85■□□□□ 0.61
NPC1L1-203ENST00000423141 TAB2Q9NYJ8 693 aa18.85■□□□□ 0.61
NPC1L1-203ENST00000423141 GLI3P10071 1580 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 ATP1A1P05023 1023 aaKnown RBP18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 EARS2Q5JPH6 523 aaKnown RBP18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 CYP26C1Q6V0L0 522 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 SYMPKQ92797 1274 aaKnown RBP18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 SHISA4Q96DD7 197 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 CAPZA3Q96KX2 299 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 ITIH6Q6UXX5 1313 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 WNT7AO00755 349 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 MYBL2P10244 700 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 GGCXP38435 758 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 SH3RF1Q7Z6J0 888 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 HINFPQ9BQA5 517 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 VIPAS39Q9H9C1 493 aa18.84■□□□□ 0.61
NPC1L1-203ENST00000423141 KIF1AQ12756 1690 aa18.83■□□□□ 0.61
NPC1L1-203ENST00000423141 GUCY2CP25092 1073 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 KRT9P35527 623 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 LIFRP42702 1097 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 SART3Q15020 963 aaKnown RBP18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 TAF7LQ5H9L4 462 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 WASF1Q92558 559 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 BLZF1Q9H2G9 400 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 EPB41L4AQ9HCS5 686 aaPredicted RBP18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 MYO1AQ9UBC5 1043 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 TUBBP07437 444 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 RRP12Q5JTH9 1297 aaKnown RBP18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 RABEP2Q9H5N1 569 aa18.83■□□□□ 0.6
NPC1L1-203ENST00000423141 RTN1Q16799 776 aa18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 DNAJC21Q5F1R6 531 aaKnown RBP18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 TRIM22Q8IYM9 498 aa18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 FAM89AQ96GI7 184 aa18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 EHD4Q9H223 541 aa18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 PKD1L3Q7Z443 1732 aa18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 PDE6AP16499 860 aa18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 COG1Q8WTW3 980 aa18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 SMARCC1Q92922 1105 aaPredicted RBP18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 YY1AP1Q9H869 796 aa18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 AATFQ9NY61 560 aaKnown RBP eCLIP18.82■□□□□ 0.6
NPC1L1-203ENST00000423141 AKAP11Q9UKA4 1901 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 WDR17Q8IZU2 1322 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 AGPSO00116 658 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 NDUFA10O95299 355 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 COPB1P53618 953 aaKnown RBP18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 STIM1Q13586 685 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 E2F4Q16254 413 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 TADA2BQ86TJ2 420 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 EFCAB13Q8IY85 973 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 SYNE4Q8N205 404 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 CTCFLQ8NI51 663 aaPredicted RBP18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 STRBPQ96SI9 672 aaKnown RBP18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 EPN1Q9Y6I3 576 aaPredicted RBP18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 NUP188Q5SRE5 1749 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 RIC1Q4ADV7 1423 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 SEMA3EO15041 775 aa18.81■□□□□ 0.6
NPC1L1-203ENST00000423141 METTL24Q5JXM2 366 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms