RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 AKR1B1P15121 316 aa31.57■■■□□ 2.64
CDK9-202ENST00000421939 OSBPP22059 807 aa31.57■■■□□ 2.64
CDK9-202ENST00000421939 CCDC129Q6ZRS4 1044 aa31.57■■■□□ 2.64
CDK9-202ENST00000421939 CCDC17Q96LX7 622 aa31.57■■■□□ 2.64
CDK9-202ENST00000421939 ARHGAP39Q9C0H5 1083 aa31.57■■■□□ 2.64
CDK9-202ENST00000421939 KIAA1683Q9H0B3 1180 aa31.57■■■□□ 2.64
CDK9-202ENST00000421939 CCDC85CA6NKD9 419 aa31.56■■■□□ 2.64
CDK9-202ENST00000421939 IFNL3Q8IZI9 196 aa31.56■■■□□ 2.64
CDK9-202ENST00000421939 ACER1Q8TDN7 264 aa31.56■■■□□ 2.64
CDK9-202ENST00000421939 ASCC2Q9H1I8 757 aaPredicted RBP31.56■■■□□ 2.64
CDK9-202ENST00000421939 HELLSQ9NRZ9 838 aa31.56■■■□□ 2.64
CDK9-202ENST00000421939 EMILIN3Q9NT22 766 aa31.56■■■□□ 2.64
CDK9-202ENST00000421939 A0A0D9SFI3 127 aa31.55■■■□□ 2.64
CDK9-202ENST00000421939 PDE4AP27815 886 aa31.55■■■□□ 2.64
CDK9-202ENST00000421939 USP14P54578 494 aa31.55■■■□□ 2.64
CDK9-202ENST00000421939 ZYXQ15942 572 aaKnown RBP31.55■■■□□ 2.64
CDK9-202ENST00000421939 C12orf42Q96LP6 360 aa31.55■■■□□ 2.64
CDK9-202ENST00000421939 FAM227BQ96M60 508 aa31.55■■■□□ 2.64
CDK9-202ENST00000421939 HOXA7P31268 230 aaPredicted RBP31.54■■■□□ 2.64
CDK9-202ENST00000421939 IRX3P78415 501 aaPredicted RBP31.54■■■□□ 2.64
CDK9-202ENST00000421939 NAPBQ9H115 298 aa31.54■■■□□ 2.64
CDK9-202ENST00000421939 PTPN22Q9Y2R2 807 aa31.54■■■□□ 2.64
CDK9-202ENST00000421939 FOXP2O15409 715 aa31.52■■■□□ 2.64
CDK9-202ENST00000421939 PSMC4P43686 418 aa31.52■■■□□ 2.64
CDK9-202ENST00000421939 GCLCP48506 637 aaPredicted RBP31.52■■■□□ 2.64
CDK9-202ENST00000421939 ICA1Q05084 483 aa31.52■■■□□ 2.64
CDK9-202ENST00000421939 NMIQ13287 307 aaPredicted RBP31.52■■■□□ 2.64
CDK9-202ENST00000421939 ECM2O94769 699 aaPredicted RBP31.51■■■□□ 2.63
CDK9-202ENST00000421939 GNRH1P01148 92 aa31.51■■■□□ 2.63
CDK9-202ENST00000421939 CTGFP29279 349 aa31.51■■■□□ 2.63
CDK9-202ENST00000421939 MCMDC2Q4G0Z9 681 aa31.51■■■□□ 2.63
CDK9-202ENST00000421939 CLEC10AQ8IUN9 316 aa31.51■■■□□ 2.63
CDK9-202ENST00000421939 STK11IPQ8N1F8 1099 aa31.51■■■□□ 2.63
CDK9-202ENST00000421939 FAM110CQ1W6H9 321 aa31.5■■■□□ 2.63
CDK9-202ENST00000421939 ANKRD13CQ8N6S4 541 aa31.5■■■□□ 2.63
CDK9-202ENST00000421939 TRIM47Q96LD4 638 aa31.5■■■□□ 2.63
CDK9-202ENST00000421939 MKNK2Q9HBH9 465 aa31.5■■■□□ 2.63
CDK9-202ENST00000421939 A0A1W2PRG0 241 aa31.49■■■□□ 2.63
CDK9-202ENST00000421939 VCAM1P19320 739 aa31.49■■■□□ 2.63
CDK9-202ENST00000421939 SDSP20132 328 aa31.49■■■□□ 2.63
CDK9-202ENST00000421939 RASA1P20936 1047 aa31.49■■■□□ 2.63
CDK9-202ENST00000421939 VPS53Q5VIR6 699 aa31.49■■■□□ 2.63
CDK9-202ENST00000421939 ZNF287Q9HBT7 754 aa31.49■■■□□ 2.63
CDK9-202ENST00000421939 ARHGEF10LQ9HCE6 1279 aa31.49■■■□□ 2.63
CDK9-202ENST00000421939 GREB1LQ9C091 1923 aaPredicted RBP31.48■■■□□ 2.63
CDK9-202ENST00000421939 FMNL1O95466 1100 aaPredicted RBP31.48■■■□□ 2.63
CDK9-202ENST00000421939 FCGRTP55899 365 aa31.48■■■□□ 2.63
CDK9-202ENST00000421939 HERVK_113P62684 666 aa31.47■■■□□ 2.63
CDK9-202ENST00000421939 PPARAQ07869 468 aa31.47■■■□□ 2.63
CDK9-202ENST00000421939 TTC22Q5TAA0 569 aa31.47■■■□□ 2.63
CDK9-202ENST00000421939 ZNF589Q86UQ0 364 aaPredicted RBP31.47■■■□□ 2.63
CDK9-202ENST00000421939 P2RX7Q99572 595 aaKnown RBP31.47■■■□□ 2.63
CDK9-202ENST00000421939 SH2D4AQ9H788 454 aa31.47■■■□□ 2.63
CDK9-202ENST00000421939 DIAPH3Q9NSV4 1193 aa31.47■■■□□ 2.63
CDK9-202ENST00000421939 CCDC171Q6TFL3 1326 aa31.47■■■□□ 2.63
CDK9-202ENST00000421939 MGAMO43451 1857 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L15C9J2P7 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L13C9JLJ4 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L11C9JVI0 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L18D6R9N7 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L22D6RA61 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L17D6RBQ6 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L19D6RCP7 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L20D6RJB6 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 SLC3A2P08195 630 aaKnown RBP31.46■■■□□ 2.63
CDK9-202ENST00000421939 PRMT2P55345 433 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 USP17L24Q0WX57 530 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 SIAH1Q8IUQ4 282 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 KANSL2Q9H9L4 492 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 PTCH2Q9Y6C5 1203 aa31.46■■■□□ 2.63
CDK9-202ENST00000421939 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.45■■■□□ 2.63
CDK9-202ENST00000421939 TMX2Q9Y320 296 aa31.45■■■□□ 2.63
CDK9-202ENST00000421939 CENPFP49454 3210 aa31.44■■■□□ 2.62
CDK9-202ENST00000421939 HIP1O00291 1037 aa31.44■■■□□ 2.62
CDK9-202ENST00000421939 PRDM1O75626 825 aa31.44■■■□□ 2.62
CDK9-202ENST00000421939 GSPT1P15170 499 aaKnown RBP31.44■■■□□ 2.62
CDK9-202ENST00000421939 HOXD10P28358 340 aa31.44■■■□□ 2.62
CDK9-202ENST00000421939 PDE4BQ07343 736 aa31.44■■■□□ 2.62
CDK9-202ENST00000421939 ALX1Q15699 326 aa31.44■■■□□ 2.62
CDK9-202ENST00000421939 GTF3C2Q8WUA4 911 aaPredicted RBP31.44■■■□□ 2.62
CDK9-202ENST00000421939 MORF4L1Q9UBU8 362 aa31.44■■■□□ 2.62
CDK9-202ENST00000421939 SRRDQ9UH36 339 aa31.44■■■□□ 2.62
CDK9-202ENST00000421939 EEF2P13639 858 aaKnown RBP31.43■■■□□ 2.62
CDK9-202ENST00000421939 CATSPERGQ6ZRH7 1159 aa31.43■■■□□ 2.62
CDK9-202ENST00000421939 RPAP3Q9H6T3 665 aaPredicted RBP31.43■■■□□ 2.62
CDK9-202ENST00000421939 MFAP1P55081 439 aaKnown RBP31.42■■■□□ 2.62
CDK9-202ENST00000421939 ATP2B2Q01814 1243 aa31.42■■■□□ 2.62
CDK9-202ENST00000421939 ZNF444Q8N0Y2 327 aaPredicted RBP31.42■■■□□ 2.62
CDK9-202ENST00000421939 LPAR1Q92633 364 aa31.42■■■□□ 2.62
CDK9-202ENST00000421939 MYPNQ86TC9 1320 aa31.42■■■□□ 2.62
CDK9-202ENST00000421939 HSPD1P10809 573 aaKnown RBP31.41■■■□□ 2.62
CDK9-202ENST00000421939 CWC27Q6UX04 472 aaKnown RBP31.41■■■□□ 2.62
CDK9-202ENST00000421939 VCPKMTQ9H867 229 aa31.41■■■□□ 2.62
CDK9-202ENST00000421939 ZMYM6O95789 1325 aa31.41■■■□□ 2.62
CDK9-202ENST00000421939 TNPO2O14787 897 aaKnown RBP31.4■■■□□ 2.62
CDK9-202ENST00000421939 KIAA1755Q5JYT7 1200 aa31.4■■■□□ 2.62
CDK9-202ENST00000421939 ARMC5Q96C12 935 aa31.4■■■□□ 2.62
CDK9-202ENST00000421939 TXNRD2Q9NNW7 524 aa31.4■■■□□ 2.62
CDK9-202ENST00000421939 ANAPC4Q9UJX5 808 aa31.4■■■□□ 2.62
CDK9-202ENST00000421939 PLIN4Q96Q06 1357 aa31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms