RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 PPP4CP60510 307 aa16.92■□□□□ 0.3
SSB-204ENST00000417292 CCNA1P78396 465 aa16.92■□□□□ 0.3
SSB-204ENST00000417292 SMAD3P84022 425 aaKnown RBP16.92■□□□□ 0.3
SSB-204ENST00000417292 ATP2B2Q01814 1243 aa16.92■□□□□ 0.3
SSB-204ENST00000417292 GRB14Q14449 540 aa16.92■□□□□ 0.3
SSB-204ENST00000417292 ZYXQ15942 572 aaKnown RBP16.92■□□□□ 0.3
SSB-204ENST00000417292 GORABQ5T7V8 394 aa16.92■□□□□ 0.3
SSB-204ENST00000417292 C12orf42Q96LP6 360 aa16.92■□□□□ 0.3
SSB-204ENST00000417292 PRDM5Q9NQX1 630 aaPredicted RBP16.92■□□□□ 0.3
SSB-204ENST00000417292 BTBD7Q9P203 1132 aa16.92■□□□□ 0.3
SSB-204ENST00000417292 FOCADQ5VW36 1801 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 E9PSI1 815 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 GH2P01242 217 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 CYBAP13498 195 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 FOSL2P15408 326 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 TRIM60Q495X7 471 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 NAA16Q6N069 864 aaPredicted RBP16.91■□□□□ 0.3
SSB-204ENST00000417292 SH3RF1Q7Z6J0 888 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
SSB-204ENST00000417292 TRIM34Q9BYJ4 488 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 PDLIM7Q9NR12 457 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 SAP30BPQ9UHR5 308 aaKnown RBP16.91■□□□□ 0.3
SSB-204ENST00000417292 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
SSB-204ENST00000417292 HDAC5Q9UQL6 1122 aa16.91■□□□□ 0.3
SSB-204ENST00000417292 TRIM43BA6NCK2 446 aa16.9■□□□□ 0.3
SSB-204ENST00000417292 BAG3O95817 575 aa16.9■□□□□ 0.3
SSB-204ENST00000417292 PLCG2P16885 1265 aa16.9■□□□□ 0.3
SSB-204ENST00000417292 SNX17Q15036 470 aa16.9■□□□□ 0.3
SSB-204ENST00000417292 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
SSB-204ENST00000417292 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
SSB-204ENST00000417292 SYMPKQ92797 1274 aaKnown RBP16.9■□□□□ 0.3
SSB-204ENST00000417292 TRIM43Q96BQ3 446 aaPredicted RBP16.9■□□□□ 0.3
SSB-204ENST00000417292 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
SSB-204ENST00000417292 VCAM1P19320 739 aa16.89■□□□□ 0.29
SSB-204ENST00000417292 SLFN5Q08AF3 891 aa16.89■□□□□ 0.29
SSB-204ENST00000417292 MTX1Q13505 466 aa16.89■□□□□ 0.29
SSB-204ENST00000417292 LBX2Q6XYB7 198 aa16.89■□□□□ 0.29
SSB-204ENST00000417292 ARRDC4Q8NCT1 418 aa16.89■□□□□ 0.29
SSB-204ENST00000417292 FEZ1Q99689 392 aa16.89■□□□□ 0.29
SSB-204ENST00000417292 SNRKQ9NRH2 765 aa16.89■□□□□ 0.29
SSB-204ENST00000417292 IVNS1ABPQ9Y6Y0 642 aa16.89■□□□□ 0.29
SSB-204ENST00000417292 COL9A1P20849 921 aa16.88■□□□□ 0.29
SSB-204ENST00000417292 ITGB8P26012 769 aa16.88■□□□□ 0.29
SSB-204ENST00000417292 USP38Q8NB14 1042 aa16.88■□□□□ 0.29
SSB-204ENST00000417292 ACER1Q8TDN7 264 aa16.88■□□□□ 0.29
SSB-204ENST00000417292 CHD9Q3L8U1 2897 aa16.88■□□□□ 0.29
SSB-204ENST00000417292 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
SSB-204ENST00000417292 KBTBD13C9JR72 458 aa16.87■□□□□ 0.29
SSB-204ENST00000417292 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
SSB-204ENST00000417292 UQCRFS1P1P0C7P4 283 aa16.87■□□□□ 0.29
SSB-204ENST00000417292 EPHB4P54760 987 aa16.87■□□□□ 0.29
SSB-204ENST00000417292 TATDN1Q6P1N9 297 aa16.87■□□□□ 0.29
SSB-204ENST00000417292 XIRP2A4UGR9 3374 aa16.86■□□□□ 0.29
SSB-204ENST00000417292 SEPT4O43236 478 aa16.86■□□□□ 0.29
SSB-204ENST00000417292 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
SSB-204ENST00000417292 CYP2E1P05181 493 aaPredicted RBP16.86■□□□□ 0.29
SSB-204ENST00000417292 ADORA2AP29274 412 aa16.86■□□□□ 0.29
SSB-204ENST00000417292 ADCYAP1R1P41586 468 aa16.86■□□□□ 0.29
SSB-204ENST00000417292 DYNLL1P63167 89 aaKnown RBP16.86■□□□□ 0.29
SSB-204ENST00000417292 OLFML2BQ68BL8 750 aa16.86■□□□□ 0.29
SSB-204ENST00000417292 FERMT2Q96AC1 680 aa16.86■□□□□ 0.29
SSB-204ENST00000417292 API5Q9BZZ5 524 aaKnown RBP16.86■□□□□ 0.29
SSB-204ENST00000417292 KIAA1683Q9H0B3 1180 aa16.86■□□□□ 0.29
SSB-204ENST00000417292 MYO5AQ9Y4I1 1855 aaKnown RBP16.86■□□□□ 0.29
SSB-204ENST00000417292 TMEM265A0A087WTH1 108 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 USP14P54578 494 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 TLE2Q04725 743 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 GRIN2CQ14957 1233 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 RAB3GAP1Q15042 981 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 LRRC41Q15345 812 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 TJAP1Q5JTD0 557 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 PRAMEF19Q5SWL8 479 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 C1orf53Q5VUE5 145 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 ATF7IPQ6VMQ6 1270 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 DPP9Q86TI2 863 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 RPAP3Q9H6T3 665 aaPredicted RBP16.85■□□□□ 0.29
SSB-204ENST00000417292 RAPGEFL1Q9UHV5 662 aa16.85■□□□□ 0.29
SSB-204ENST00000417292 ZNF236Q9UL36 1845 aa16.84■□□□□ 0.29
SSB-204ENST00000417292 REV3LO60673 3130 aa16.84■□□□□ 0.29
SSB-204ENST00000417292 TNFRSF10AO00220 468 aa16.84■□□□□ 0.29
SSB-204ENST00000417292 COBLO75128 1261 aa16.84■□□□□ 0.29
SSB-204ENST00000417292 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
SSB-204ENST00000417292 MOV10L1Q9BXT6 1211 aaKnown RBP16.84■□□□□ 0.29
SSB-204ENST00000417292 PNMA6EA0A0J9YXQ4 647 aa16.83■□□□□ 0.28
SSB-204ENST00000417292 GNAI3P08754 354 aa16.83■□□□□ 0.28
SSB-204ENST00000417292 MYH1P12882 1939 aa16.83■□□□□ 0.28
SSB-204ENST00000417292 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.28
SSB-204ENST00000417292 PIH1D3Q9NQM4 214 aaKnown RBP16.83■□□□□ 0.28
SSB-204ENST00000417292 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
SSB-204ENST00000417292 CHD7Q9P2D1 2997 aa16.82■□□□□ 0.28
SSB-204ENST00000417292 STRNO43815 780 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms