RNA–Protein interactions for RNA: ENST00000416445.6

CALCOCO2-203, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CALCOCO2, Length 1,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-203ENST00000416445 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
CALCOCO2-203ENST00000416445 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
CALCOCO2-203ENST00000416445 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
CALCOCO2-203ENST00000416445 A0A0G2JMZ2 1700 aa11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 HERVK_113P62684 666 aa11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 ABCB5Q2M3G0 1257 aa11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 CERKLQ49MI3 558 aaPredicted RBP11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 UBE2Q1Q7Z7E8 422 aa11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 AS3MTQ9HBK9 375 aa11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 MORF4L1Q9UBU8 362 aa11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
CALCOCO2-203ENST00000416445 IGSF3O75054 1194 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 SLC34A2O95436 690 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 POLR3DP05423 398 aaPredicted RBP11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 VCAM1P19320 739 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 HOXD10P28358 340 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 PAGR1Q9BTK6 254 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 CRNKL1Q9BZJ0 848 aaKnown RBP11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 RNF208Q9H0X6 261 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 TMOD4Q9NZQ9 345 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 BIN2Q9UBW5 565 aaPredicted RBP11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 U3KPZ7 1027 aaPredicted RBP11.62□□□□□ -0.55
CALCOCO2-203ENST00000416445 AKR1B1P15121 316 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 GJA8P48165 433 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 RRP1P56182 461 aaKnown RBP11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 IRX3P78415 501 aaPredicted RBP11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 IRF5Q13568 498 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 CCL14Q16627 93 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 TTC6Q86TZ1 520 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 U2AF1L4Q8WU68 220 aaKnown RBP11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 TRIB2Q92519 343 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 CRBNQ96SW2 442 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 BTBD7Q9P203 1132 aa11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 ZNFX1Q9P2E3 1918 aaKnown RBP11.61□□□□□ -0.55
CALCOCO2-203ENST00000416445 C19orf81C9J6K1 198 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 USP17L12C9JPN9 530 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 USP17L21D6R901 530 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 M0R2C6 588 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 GJB1P08034 283 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 ERVK-24P63145 666 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 USP17L2Q6R6M4 530 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 STK11IPQ8N1F8 1099 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 DIS3LQ8TF46 1054 aaKnown RBP11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 C12orf42Q96LP6 360 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 DEFB118Q96PH6 123 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 FEZ1Q99689 392 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 KIAA1683Q9H0B3 1180 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 ECHDC1Q9NTX5 307 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 MYH4Q9Y623 1939 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 H0YGN5 161 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 CYP2B6P20813 491 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 UBE3CQ15386 1083 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 C12orf60Q5U649 245 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 CTR9Q6PD62 1173 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 CATSPERGQ6ZRH7 1159 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 CERS3Q8IU89 383 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 PI4K2BQ8TCG2 481 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 USP6NLQ92738 828 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 COA7Q96BR5 231 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 SEC62Q99442 399 aaKnown RBP11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 EPB41L4AQ9HCS5 686 aaPredicted RBP11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 PAK6Q9NQU5 681 aaPredicted RBP11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 GINM1Q9NU53 330 aa11.6□□□□□ -0.55
CALCOCO2-203ENST00000416445 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 CDK8P49336 464 aa11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 PABPC4Q13310 644 aaKnown RBP eCLIP11.59□□□□□ -0.558e-7■□□□□ 8.3
CALCOCO2-203ENST00000416445 MORN1Q5T089 497 aa11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 SAMD1Q6SPF0 538 aaPredicted RBP11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 STRBPQ96SI9 672 aaKnown RBP11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 RPAP3Q9H6T3 665 aaPredicted RBP11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 FLRT1Q9NZU1 646 aa11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 SLC4A4Q9Y6R1 1079 aa11.59□□□□□ -0.55
CALCOCO2-203ENST00000416445 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 GSG1L2A8MUP6 293 aa11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 FOXP2O15409 715 aa11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 SGPL1O95470 568 aa11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 UBXN2AP68543 259 aa11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 TMED8Q6PL24 325 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 GPR142Q7Z601 462 aa11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 SPICE1Q8N0Z3 855 aa11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 KBTBD3Q8NAB2 608 aa11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.58□□□□□ -0.56
CALCOCO2-203ENST00000416445 USP17L15C9J2P7 530 aa11.57□□□□□ -0.56
CALCOCO2-203ENST00000416445 USP17L13C9JLJ4 530 aa11.57□□□□□ -0.56
CALCOCO2-203ENST00000416445 USP17L11C9JVI0 530 aa11.57□□□□□ -0.56
CALCOCO2-203ENST00000416445 USP17L18D6R9N7 530 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms