RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 GUCY2FP51841 1108 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 LDHAL6AQ6ZMR3 332 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 NOC4LQ9BVI4 516 aaKnown RBP15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 L1RE1Q9UN81 338 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 EYA2O00167 538 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 NDUFA10O95299 355 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 PDCLQ13371 301 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 CCDC40Q4G0X9 1142 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 FERMT2Q96AC1 680 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 PNKPQ96T60 521 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 BLZF1Q9H2G9 400 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 C2orf54Q08AI8 447 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 E2F5Q15329 346 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 NOX5Q96PH1 765 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 ZHX3Q9H4I2 956 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 TCHHQ07283 1943 aa15.53■□□□□ 0.08
CLTCL1-201ENST00000412649 PLEKHG3A1L390 1219 aa15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 NUTM2BA6NNL0 878 aaPredicted RBP15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 NUTM2EB1AL46 878 aaPredicted RBP15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 FGAP02671 866 aa15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 ALS2CLQ60I27 953 aa15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 NNTQ13423 1086 aa15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 CSGALNACT2Q8N6G5 542 aa15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 CCDC43Q96MW1 224 aaKnown RBP15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 GPHNQ9NQX3 736 aaPredicted RBP15.52■□□□□ 0.08
CLTCL1-201ENST00000412649 KIF5BP33176 963 aa15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 MAGEA1P43355 309 aa15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 LRRC59Q96AG4 307 aaKnown RBP15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 GSDMAQ96QA5 445 aa15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 MCM7P33993 719 aa15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 ASIC1P78348 528 aa15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 SOGA3Q5TF21 947 aa15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 CCDC155Q8N6L0 562 aa15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 TACO1Q9BSH4 297 aaKnown RBP15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 TUBE1Q9UJT0 475 aa15.52■□□□□ 0.07
CLTCL1-201ENST00000412649 GSPT2Q8IYD1 628 aaKnown RBP15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 MAST3O60307 1309 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 HNRNPH1P31943 449 aaKnown RBP15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 ATP2B2Q01814 1243 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 PRPF4BQ13523 1007 aaKnown RBP15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 MICAL1Q8TDZ2 1067 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 AIFM3Q96NN9 605 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 ZKSCAN3Q9BRR0 538 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 KAT14Q9H8E8 782 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 TSKSQ9UJT2 592 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 PHF8Q9UPP1 1060 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 RNASE9P60153 205 aaKnown RBP15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 FAM69CQ0P6D2 419 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 PROSER3Q2NL68 480 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 SMYD4Q8IYR2 804 aaPredicted RBP15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 MSANTD4Q8NCY6 345 aa15.51■□□□□ 0.07
CLTCL1-201ENST00000412649 RPSAP08865 295 aaKnown RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 PPP1R7Q15435 360 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 GKAP1Q5VSY0 366 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 USPL1Q5W0Q7 1092 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 ACTR5Q9H9F9 607 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 ABCF2Q9UG63 623 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 TEX33O43247 280 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 SF3B2Q13435 895 aaKnown RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 ESR2Q92731 530 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 MED23Q9ULK4 1368 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 ZC3H13Q5T200 1668 aaKnown RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 INO80Q9ULG1 1556 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 TLDC2A0PJX2 215 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 LACTBP83111 547 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 SHC4Q6S5L8 630 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 ADGRB1O14514 1584 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 KIF4AO95239 1232 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 AP1ARQ63HQ0 302 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 FOXR1Q6PIV2 292 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 RIN2Q8WYP3 895 aaPredicted RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 CALML4Q96GE6 196 aa15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 SEPT11Q9NVA2 429 aaKnown RBP15.5■□□□□ 0.07
CLTCL1-201ENST00000412649 SRGAP2O75044 1071 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 DNM2P50570 870 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 EMBQ6PCB8 327 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 FNBP4Q8N3X1 1017 aaPredicted RBP15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 CSRNP2Q9H175 543 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 H7C1D1 291 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 COBLO75128 1261 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 UQCRFS1P1P0C7P4 283 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 SSR1P43307 286 aaKnown RBP15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 TTC38Q5R3I4 469 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 STOX1Q6ZVD7 989 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 ABHD10Q9NUJ1 306 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 HPCAL4Q9UM19 191 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 VIMP08670 466 aaKnown RBP15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 PEX19P40855 299 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 IRAK1P51617 712 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 TYW1BQ6NUM6 668 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 METTL16Q86W50 562 aaKnown RBP15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 KLHL7Q8IXQ5 586 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 SPATS2LQ9NUQ6 558 aaKnown RBP15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 MYO3AQ8NEV4 1616 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 RTL9Q8NET4 1388 aa15.49■□□□□ 0.07
CLTCL1-201ENST00000412649 NR1D1P20393 614 aa15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 IFIT1BQ5T764 474 aaKnown RBP15.48■□□□□ 0.07
CLTCL1-201ENST00000412649 RAD9BQ6WBX8 426 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms