RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 STOML1Q9UBI4 398 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 RNF112Q9ULX5 631 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 PCDHGC5Q9Y5F6 944 aa6.56□□□□□ -1.36
LSM5-205ENST00000409952 KDM2BQ8NHM5 1336 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 SART1O43290 800 aaKnown RBP6.55□□□□□ -1.36
LSM5-205ENST00000409952 KCNQ2O43526 872 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 GSTP1P09211 210 aaKnown RBP6.55□□□□□ -1.36
LSM5-205ENST00000409952 IMPDH2P12268 514 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 DRD2P14416 443 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 MCM4P33991 863 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 ZNF165P49910 485 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 PPP2R3AQ06190 1150 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 ZNF252P-AS1Q0IIN9 211 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 BIRC2Q13490 618 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 BRDTQ58F21 947 aaPredicted RBP6.55□□□□□ -1.36
LSM5-205ENST00000409952 RNF43Q68DV7 783 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 JAMLQ86YT9 394 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 TRIM42Q8IWZ5 723 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 STK35Q8TDR2 534 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 CHAC2Q8WUX2 184 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 WDR18Q9BV38 432 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 CCDC86Q9H6F5 360 aaKnown RBP6.55□□□□□ -1.36
LSM5-205ENST00000409952 CD2APQ9Y5K6 639 aa6.55□□□□□ -1.36
LSM5-205ENST00000409952 HMX2A2RU54 273 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 ENC1O14682 589 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 TLR3O15455 904 aaKnown RBP6.54□□□□□ -1.36
LSM5-205ENST00000409952 CREB3O43889 395 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 ZNF862O60290 1169 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 DIAPH1O60610 1272 aaKnown RBP6.54□□□□□ -1.36
LSM5-205ENST00000409952 AOC2O75106 756 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 GJB6O95452 261 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 ARNTP27540 789 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 MAP4P27816 1152 aaKnown RBP6.54□□□□□ -1.36
LSM5-205ENST00000409952 ZNF157P51786 506 aaPredicted RBP6.54□□□□□ -1.36
LSM5-205ENST00000409952 CASP7P55210 303 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 EVA1CP58658 441 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 NFIAQ12857 509 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 CWF19L2Q2TBE0 894 aaKnown RBP6.54□□□□□ -1.36
LSM5-205ENST00000409952 KIF4BQ2VIQ3 1234 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 SGO2Q562F6 1265 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 CDPF1Q6NVV7 123 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 BEND4Q6ZU67 534 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 ST13P5Q8NFI4 369 aaPredicted RBP6.54□□□□□ -1.36
LSM5-205ENST00000409952 FBXO27Q8NI29 283 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 UBE2Q2Q8WVN8 375 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 ZNF669Q96BR6 464 aaPredicted RBP6.54□□□□□ -1.36
LSM5-205ENST00000409952 MFSD3Q96ES6 412 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 RPS6KC1Q96S38 1066 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 PFDN2Q9UHV9 154 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 ZNRF3Q9ULT6 936 aa6.54□□□□□ -1.36
LSM5-205ENST00000409952 ALG1L2C9J202 215 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 KIF3BO15066 747 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 F13A1P00488 732 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 POU3F3P20264 500 aaPredicted RBP6.53□□□□□ -1.36
LSM5-205ENST00000409952 BMP6P22004 513 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 NME2P22392 152 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 PMLP29590 882 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 SSRP1Q08945 709 aaKnown RBP6.53□□□□□ -1.36
LSM5-205ENST00000409952 MPP2Q14168 576 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 ZDHHC13Q8IUH4 622 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 SULF2Q8IWU5 870 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 REXO1Q8N1G1 1221 aaKnown RBP6.53□□□□□ -1.36
LSM5-205ENST00000409952 RBBP8NLQ8NC74 664 aaPredicted RBP6.53□□□□□ -1.36
LSM5-205ENST00000409952 ZSWIM2Q8NEG5 633 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 GATAD2BQ8WXI9 593 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
LSM5-205ENST00000409952 TNKS2Q9H2K2 1166 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 ACSS3Q9H6R3 686 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 ZMYM5Q9UJ78 669 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 ACTL7BQ9Y614 415 aa6.53□□□□□ -1.36
LSM5-205ENST00000409952 GAS2O43903 313 aaKnown RBP6.52□□□□□ -1.37
LSM5-205ENST00000409952 STAT3P40763 770 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 EPHB1P54762 984 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 TMEM67Q5HYA8 995 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 SCARA3Q6AZY7 606 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 BNC2Q6ZN30 1099 aaPredicted RBP6.52□□□□□ -1.37
LSM5-205ENST00000409952 SPATC1Q76KD6 591 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 LSRQ86X29 649 aaPredicted RBP6.52□□□□□ -1.37
LSM5-205ENST00000409952 THNSL2Q86YJ6 484 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 RAVER1Q8IY67 606 aaKnown RBP6.52□□□□□ -1.37
LSM5-205ENST00000409952 DBNDD2Q9BQY9 259 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 CAAP1Q9H8G2 361 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 CRIM1Q9NZV1 1036 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 GPN3Q9UHW5 284 aaPredicted RBP6.52□□□□□ -1.37
LSM5-205ENST00000409952 MCM8Q9UJA3 840 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 PPP1R9AQ9ULJ8 1098 aa6.52□□□□□ -1.37
LSM5-205ENST00000409952 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.51□□□□□ -1.37
LSM5-205ENST00000409952 FAM221AA4D161 298 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 PRR19A6NJB7 356 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 TMPRSS2O15393 492 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 PAGE1O75459 146 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 DDAH1O94760 285 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 MYCLP1P12525 358 aaPredicted RBP6.51□□□□□ -1.37
LSM5-205ENST00000409952 LMNB1P20700 586 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 SOX5P35711 763 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 UBE4AQ14139 1066 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 ARTNQ5T4W7 220 aa6.51□□□□□ -1.37
LSM5-205ENST00000409952 DIEXFQ68CQ4 756 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms