RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SNX11Q9Y5W9 270 aa7.67□□□□□ -1.18
HMGB1P13-201ENST00000406019 ST14Q9Y5Y6 855 aa7.67□□□□□ -1.18
HMGB1P13-201ENST00000406019 TMEM265A0A087WTH1 108 aa7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 CHURC1-FNTBB4DL54 471 aa7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 CD8BP10966 210 aa7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 CWF19L2Q2TBE0 894 aaKnown RBP7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 FAM13CQ8NE31 585 aa7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 FLCNQ8NFG4 579 aa7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 SEMA3GQ9NS98 782 aa7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 ANGEL1Q9UNK9 670 aaKnown RBP7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 SLC5A6Q9Y289 635 aa7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 PITPNM2Q9BZ72 1349 aa7.66□□□□□ -1.18
HMGB1P13-201ENST00000406019 CLCN7P51798 805 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 SFRP5Q5T4F7 317 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 C9orf131Q5VYM1 1079 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 CDH24Q86UP0 819 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 USP48Q86UV5 1035 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 KIAA0825Q8IV33 1275 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 REXO1Q8N1G1 1221 aaKnown RBP7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 MFSD4AQ8N468 514 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 RNF34Q969K3 372 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 Q96M66 194 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 CEP131Q9UPN4 1083 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 PCDHB14Q9Y5E9 798 aa7.65□□□□□ -1.18
HMGB1P13-201ENST00000406019 SLC22A31A6NKX4 558 aa7.64□□□□□ -1.19
HMGB1P13-201ENST00000406019 FUT4P22083 530 aa7.64□□□□□ -1.19
HMGB1P13-201ENST00000406019 CLCQ05315 142 aa7.64□□□□□ -1.19
HMGB1P13-201ENST00000406019 SF3A1Q15459 793 aaKnown RBP7.64□□□□□ -1.19
HMGB1P13-201ENST00000406019 NT5DC4Q86YG4 428 aa7.64□□□□□ -1.19
HMGB1P13-201ENST00000406019 HRASLS5Q96KN8 279 aa7.64□□□□□ -1.19
HMGB1P13-201ENST00000406019 SPON2Q9BUD6 331 aa7.64□□□□□ -1.19
HMGB1P13-201ENST00000406019 TPX2Q9ULW0 747 aaKnown RBP7.64□□□□□ -1.19
HMGB1P13-201ENST00000406019 MEIS3P2A8K0S8 358 aa7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 YARSP54577 528 aaKnown RBP7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 APOBRQ0VD83 1088 aa7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 AOC3Q16853 763 aa7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 SEZ6Q53EL9 994 aa7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 ZNF746Q6NUN9 644 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 UBXN4Q92575 508 aa7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 VWCEQ96DN2 955 aa7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 COX4I2Q96KJ9 171 aa7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 ADAMTS6Q9UKP5 1117 aa7.63□□□□□ -1.19
HMGB1P13-201ENST00000406019 GNAT3A8MTJ3 354 aa7.62□□□□□ -1.19
HMGB1P13-201ENST00000406019 KIR3DL1P43629 444 aa7.62□□□□□ -1.19
HMGB1P13-201ENST00000406019 TNK2Q07912 1038 aa7.62□□□□□ -1.19
HMGB1P13-201ENST00000406019 DIEXFQ68CQ4 756 aaKnown RBP7.62□□□□□ -1.19
HMGB1P13-201ENST00000406019 OVOS1Q6IE37 1185 aa7.62□□□□□ -1.19
HMGB1P13-201ENST00000406019 TGIF2Q9GZN2 237 aa7.62□□□□□ -1.19
HMGB1P13-201ENST00000406019 GMIPQ9P107 970 aa7.62□□□□□ -1.19
HMGB1P13-201ENST00000406019 KLHL3Q9UH77 587 aa7.62□□□□□ -1.19
HMGB1P13-201ENST00000406019 UBOX5O94941 541 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 ETV3P41162 512 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 CDCP2Q5VXM1 449 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 MCTP1Q6DN14 999 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 ARHGAP27Q6ZUM4 889 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 AGBL5Q8NDL9 886 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 BAHD1Q8TBE0 780 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 HSPA12BQ96MM6 686 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 TINF2Q9BSI4 451 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 KRTAP4-8Q9BYQ9 185 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 ANTXR1Q9H6X2 564 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 CNNM2Q9H8M5 875 aa7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 MBNL3Q9NUK0 354 aaKnown RBP7.61□□□□□ -1.19
HMGB1P13-201ENST00000406019 RGS13O14921 159 aa7.6□□□□□ -1.19
HMGB1P13-201ENST00000406019 SRFP11831 508 aa7.6□□□□□ -1.19
HMGB1P13-201ENST00000406019 ITGB5P18084 799 aa7.6□□□□□ -1.19
HMGB1P13-201ENST00000406019 TP53INP2Q8IXH6 220 aa7.6□□□□□ -1.19
HMGB1P13-201ENST00000406019 SLC43A3Q8NBI5 491 aa7.6□□□□□ -1.19
HMGB1P13-201ENST00000406019 PIWIL2Q8TC59 973 aaKnown RBP7.6□□□□□ -1.19
HMGB1P13-201ENST00000406019 RNF141Q8WVD5 230 aa7.6□□□□□ -1.19
HMGB1P13-201ENST00000406019 NKD1Q969G9 470 aa7.6□□□□□ -1.19
HMGB1P13-201ENST00000406019 CBX7O95931 251 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 CYP7A1P22680 504 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 ZNF792Q3KQV3 632 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 ARSHQ5FYA8 562 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 THAP5Q7Z6K1 395 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 DTWD2Q8NBA8 298 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 ATG4CQ96DT6 458 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 CCDC74BQ96LY2 380 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 KREMEN1Q96MU8 473 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 KIF2CQ99661 725 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 DUSP15Q9H1R2 295 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 ATP13A1Q9HD20 1204 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 ZNRF3Q9ULT6 936 aa7.59□□□□□ -1.19
HMGB1P13-201ENST00000406019 LRRN2O75325 713 aa7.58□□□□□ -1.2
HMGB1P13-201ENST00000406019 RNASE1P07998 156 aaKnown RBP7.58□□□□□ -1.2
HMGB1P13-201ENST00000406019 ZNF165P49910 485 aa7.58□□□□□ -1.2
HMGB1P13-201ENST00000406019 GAB4Q2WGN9 574 aa7.58□□□□□ -1.2
HMGB1P13-201ENST00000406019 GK5Q6ZS86 529 aa7.58□□□□□ -1.2
HMGB1P13-201ENST00000406019 ZNF654Q8IZM8 581 aa7.58□□□□□ -1.2
HMGB1P13-201ENST00000406019 TMEM40Q8WWA1 233 aa7.58□□□□□ -1.2
HMGB1P13-201ENST00000406019 ASB11Q8WXH4 323 aa7.58□□□□□ -1.2
HMGB1P13-201ENST00000406019 FAM155AB1AL88 458 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P13-201ENST00000406019 TNFRSF10CO14798 259 aa7.57□□□□□ -1.2
HMGB1P13-201ENST00000406019 POLR2BP30876 1174 aaKnown RBP7.57□□□□□ -1.2
HMGB1P13-201ENST00000406019 GJA8P48165 433 aa7.57□□□□□ -1.2
HMGB1P13-201ENST00000406019 IRAK1P51617 712 aa7.57□□□□□ -1.2
HMGB1P13-201ENST00000406019 PAK2Q13177 524 aa7.57□□□□□ -1.2
HMGB1P13-201ENST00000406019 ANGEL2Q5VTE6 544 aaKnown RBP7.57□□□□□ -1.2
HMGB1P13-201ENST00000406019 CDKAL1Q5VV42 579 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms