RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 CERKLQ49MI3 558 aaPredicted RBP23.58■■□□□ 1.37
HDAC11-205ENST00000404548 POTEEQ6S8J3 1075 aa23.58■■□□□ 1.37
HDAC11-205ENST00000404548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.58■■□□□ 1.37
HDAC11-205ENST00000404548 FEZ1Q99689 392 aa23.58■■□□□ 1.37
HDAC11-205ENST00000404548 APBA2Q99767 749 aa23.58■■□□□ 1.37
HDAC11-205ENST00000404548 PORCNQ9H237 461 aa23.58■■□□□ 1.37
HDAC11-205ENST00000404548 ALPK3Q96L96 1907 aa23.57■■□□□ 1.36
HDAC11-205ENST00000404548 MS4A1P11836 297 aa23.57■■□□□ 1.36
HDAC11-205ENST00000404548 CCNA1P78396 465 aa23.57■■□□□ 1.36
HDAC11-205ENST00000404548 ABCB5Q2M3G0 1257 aa23.57■■□□□ 1.36
HDAC11-205ENST00000404548 Q3C1V9 767 aa23.57■■□□□ 1.36
HDAC11-205ENST00000404548 PLEKHH3Q7Z736 793 aa23.57■■□□□ 1.36
HDAC11-205ENST00000404548 CCAR1Q8IX12 1150 aaKnown RBP23.57■■□□□ 1.36
HDAC11-205ENST00000404548 NDUFB9Q9Y6M9 179 aa23.57■■□□□ 1.36
HDAC11-205ENST00000404548 PEX10O60683 326 aa23.56■■□□□ 1.36
HDAC11-205ENST00000404548 RHPN1Q8TCX5 695 aa23.56■■□□□ 1.36
HDAC11-205ENST00000404548 PAGR1Q9BTK6 254 aa23.56■■□□□ 1.36
HDAC11-205ENST00000404548 C11orf49Q9H6J7 331 aa23.56■■□□□ 1.36
HDAC11-205ENST00000404548 CABP5Q9NP86 173 aa23.56■■□□□ 1.36
HDAC11-205ENST00000404548 GLRX3O76003 335 aaKnown RBP23.55■■□□□ 1.36
HDAC11-205ENST00000404548 VCAM1P19320 739 aa23.55■■□□□ 1.36
HDAC11-205ENST00000404548 BMP8BP34820 402 aa23.55■■□□□ 1.36
HDAC11-205ENST00000404548 SHMT1P34896 483 aa23.55■■□□□ 1.36
HDAC11-205ENST00000404548 GABPAQ06546 454 aa23.55■■□□□ 1.36
HDAC11-205ENST00000404548 CATSPERGQ6ZRH7 1159 aa23.55■■□□□ 1.36
HDAC11-205ENST00000404548 DNAH12Q6ZR08 3092 aa23.55■■□□□ 1.36
HDAC11-205ENST00000404548 COL6A3P12111 3177 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 MAGEB6P1A0A0J9YX57 407 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 CNMDO75829 334 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 PDE6AP16499 860 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 PLCD1P51178 756 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 CACNB2Q08289 660 aaPredicted RBP23.54■■□□□ 1.36
HDAC11-205ENST00000404548 RAB3GAP1Q15042 981 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 RPAP2Q8IXW5 612 aaPredicted RBP23.54■■□□□ 1.36
HDAC11-205ENST00000404548 CLASRPQ8N2M8 674 aaKnown RBP23.54■■□□□ 1.36
HDAC11-205ENST00000404548 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 KIF1BPQ96EK5 621 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 GDF15Q99988 308 aa23.54■■□□□ 1.36
HDAC11-205ENST00000404548 CRNKL1Q9BZJ0 848 aaKnown RBP23.54■■□□□ 1.36
HDAC11-205ENST00000404548 MAP2K5Q13163 448 aa23.53■■□□□ 1.36
HDAC11-205ENST00000404548 SLC9C2Q5TAH2 1124 aa23.53■■□□□ 1.36
HDAC11-205ENST00000404548 NAV1Q8NEY1 1877 aa23.52■■□□□ 1.36
HDAC11-205ENST00000404548 COL6A1P12109 1028 aa23.52■■□□□ 1.36
HDAC11-205ENST00000404548 ZYXQ15942 572 aaKnown RBP23.52■■□□□ 1.36
HDAC11-205ENST00000404548 C7orf61Q8IZ16 206 aa23.52■■□□□ 1.36
HDAC11-205ENST00000404548 MIER1Q8N108 512 aa23.52■■□□□ 1.36
HDAC11-205ENST00000404548 ACER1Q8TDN7 264 aa23.52■■□□□ 1.36
HDAC11-205ENST00000404548 IL1RAPL2Q9NP60 686 aa23.52■■□□□ 1.36
HDAC11-205ENST00000404548 STAP2Q9UGK3 403 aa23.52■■□□□ 1.36
HDAC11-205ENST00000404548 SLC15A5A6NIM6 579 aa23.51■■□□□ 1.35
HDAC11-205ENST00000404548 HMMRO75330 724 aa23.51■■□□□ 1.35
HDAC11-205ENST00000404548 POLR3DP05423 398 aaPredicted RBP23.51■■□□□ 1.35
HDAC11-205ENST00000404548 HOXC6P09630 235 aa23.51■■□□□ 1.35
HDAC11-205ENST00000404548 GUCY1A2P33402 732 aa23.51■■□□□ 1.35
HDAC11-205ENST00000404548 LHX8Q68G74 356 aa23.51■■□□□ 1.35
HDAC11-205ENST00000404548 CWC22Q9HCG8 908 aaKnown RBP23.51■■□□□ 1.35
HDAC11-205ENST00000404548 PFASO15067 1338 aa23.51■■□□□ 1.35
HDAC11-205ENST00000404548 TCRBV5S4A2TA0A5A2 114 aa23.5■■□□□ 1.35
HDAC11-205ENST00000404548 SPDYE16A6NNV3 312 aaPredicted RBP23.5■■□□□ 1.35
HDAC11-205ENST00000404548 CCL14Q16627 93 aa23.5■■□□□ 1.35
HDAC11-205ENST00000404548 EDC3Q96F86 508 aaKnown RBP23.5■■□□□ 1.35
HDAC11-205ENST00000404548 DDX19BQ9UMR2 479 aa23.5■■□□□ 1.35
HDAC11-205ENST00000404548 RAB11FIP3O75154 756 aa23.49■■□□□ 1.35
HDAC11-205ENST00000404548 PTPREP23469 700 aa23.49■■□□□ 1.35
HDAC11-205ENST00000404548 GRB14Q14449 540 aa23.49■■□□□ 1.35
HDAC11-205ENST00000404548 GPR153Q6NV75 609 aa23.49■■□□□ 1.35
HDAC11-205ENST00000404548 RPAP3Q9H6T3 665 aaPredicted RBP23.49■■□□□ 1.35
HDAC11-205ENST00000404548 DCP1AQ9NPI6 582 aaPredicted RBP23.49■■□□□ 1.35
HDAC11-205ENST00000404548 MCM9Q9NXL9 1143 aa23.49■■□□□ 1.35
HDAC11-205ENST00000404548 SWAP70Q9UH65 585 aa23.49■■□□□ 1.35
HDAC11-205ENST00000404548 ZNF532Q9HCE3 1301 aa23.49■■□□□ 1.35
HDAC11-205ENST00000404548 A0A0C4DFX4 3053 aa23.48■■□□□ 1.35
HDAC11-205ENST00000404548 IFIT2P09913 472 aaKnown RBP23.48■■□□□ 1.35
HDAC11-205ENST00000404548 SEPT2Q15019 361 aa23.48■■□□□ 1.35
HDAC11-205ENST00000404548 MFSD14CQ5VZR4 134 aa23.48■■□□□ 1.35
HDAC11-205ENST00000404548 ZBTB40Q9NUA8 1239 aa23.48■■□□□ 1.35
HDAC11-205ENST00000404548 BTBD7Q9P203 1132 aa23.48■■□□□ 1.35
HDAC11-205ENST00000404548 IVNS1ABPQ9Y6Y0 642 aa23.48■■□□□ 1.35
HDAC11-205ENST00000404548 GOLIM4O00461 696 aa23.47■■□□□ 1.35
HDAC11-205ENST00000404548 MSCO60682 206 aa23.47■■□□□ 1.35
HDAC11-205ENST00000404548 CCND3P30281 292 aaPredicted RBP23.47■■□□□ 1.35
HDAC11-205ENST00000404548 TMEM179Q6ZVK1 233 aa23.47■■□□□ 1.35
HDAC11-205ENST00000404548 CHMP4BQ9H444 224 aaKnown RBP23.47■■□□□ 1.35
HDAC11-205ENST00000404548 ZNF236Q9UL36 1845 aa23.47■■□□□ 1.35
HDAC11-205ENST00000404548 IGHA2P01877 340 aa23.46■■□□□ 1.35
HDAC11-205ENST00000404548 SIRT2Q8IXJ6 389 aa23.46■■□□□ 1.35
HDAC11-205ENST00000404548 DNAJC2Q99543 621 aaKnown RBP23.46■■□□□ 1.35
HDAC11-205ENST00000404548 HOXC10Q9NYD6 342 aa23.46■■□□□ 1.35
HDAC11-205ENST00000404548 ZMYND8Q9ULU4 1186 aaPredicted RBP23.46■■□□□ 1.35
HDAC11-205ENST00000404548 LAMA2P24043 3122 aaKnown RBP23.46■■□□□ 1.35
HDAC11-205ENST00000404548 A0A0G2JMZ2 1700 aa23.45■■□□□ 1.34
HDAC11-205ENST00000404548 A0A1W2PRG0 241 aa23.45■■□□□ 1.34
HDAC11-205ENST00000404548 SOX1O00570 391 aaPredicted RBP23.45■■□□□ 1.34
HDAC11-205ENST00000404548 COG2Q14746 738 aa23.45■■□□□ 1.34
HDAC11-205ENST00000404548 LCORLQ8N3X6 602 aa23.45■■□□□ 1.34
HDAC11-205ENST00000404548 MB21D1Q8N884 522 aa23.45■■□□□ 1.34
HDAC11-205ENST00000404548 SDR42E1Q8WUS8 393 aa23.45■■□□□ 1.34
HDAC11-205ENST00000404548 LPAR1Q92633 364 aa23.45■■□□□ 1.34
HDAC11-205ENST00000404548 ATP8A2Q9NTI2 1148 aa23.45■■□□□ 1.34
HDAC11-205ENST00000404548 STRNO43815 780 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms