RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 BRI3BPQ8WY22 251 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 KIAA1683Q9H0B3 1180 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 SH2D4AQ9H788 454 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 LOC285556D6RIA3 1793 aa20.94■□□□□ 0.94
CTNS-203ENST00000399306 IGKV6D-41A0A0C4DH26 115 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 MPHOSPH10O00566 681 aaKnown RBP20.93■□□□□ 0.94
CTNS-203ENST00000399306 MOGSQ13724 837 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 RAB3GAP1Q15042 981 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 ANKRD23Q86SG2 305 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 C12orf42Q96LP6 360 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 BEGAINQ9BUH8 593 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 NBPF3Q9H094 633 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 CNNM2Q9H8M5 875 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 ARHGEF10LQ9HCE6 1279 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 ANO2Q9NQ90 1003 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 GTF3C3Q9Y5Q9 886 aa20.93■□□□□ 0.94
CTNS-203ENST00000399306 REC8O95072 547 aa20.92■□□□□ 0.94
CTNS-203ENST00000399306 SHROOM1Q2M3G4 852 aaPredicted RBP20.92■□□□□ 0.94
CTNS-203ENST00000399306 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.92■□□□□ 0.94
CTNS-203ENST00000399306 TCP11L1Q9NUJ3 509 aa20.92■□□□□ 0.94
CTNS-203ENST00000399306 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.92■□□□□ 0.94
CTNS-203ENST00000399306 NYAP2Q9P242 653 aa20.92■□□□□ 0.94
CTNS-203ENST00000399306 RBM8AQ9Y5S9 174 aaKnown RBP20.92■□□□□ 0.94
CTNS-203ENST00000399306 TRIM75PA6NK02 468 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 PRDM1O75626 825 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 TSPY3P0CV98 308 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 TSPY8P0CW00 308 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 HAND2P61296 217 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 ICA1Q05084 483 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 USP17L2Q6R6M4 530 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 TBC1D10CQ8IV04 446 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 ESR2Q92731 530 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 PTPN18Q99952 460 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.91■□□□□ 0.94
CTNS-203ENST00000399306 TMX2Q9Y320 296 aa20.91■□□□□ 0.94
CTNS-203ENST00000399306 TSPY2A6NKD2 308 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 IGF2BP3O00425 579 aaKnown RBP eCLIP20.9■□□□□ 0.94
CTNS-203ENST00000399306 CYP21A2P08686 494 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 NOVP48745 357 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 TFAP4Q01664 338 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 PABPC4Q13310 644 aaKnown RBP eCLIP20.9■□□□□ 0.94
CTNS-203ENST00000399306 NECTIN1Q15223 517 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 CCDC178Q5BJE1 867 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 NOM1Q5C9Z4 860 aaKnown RBP20.9■□□□□ 0.94
CTNS-203ENST00000399306 CCDC84Q86UT8 332 aaPredicted RBP20.9■□□□□ 0.94
CTNS-203ENST00000399306 MKL1Q969V6 931 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 KRT23Q9C075 422 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 TMOD4Q9NZQ9 345 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 AGTPBP1Q9UPW5 1226 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 TACC3Q9Y6A5 838 aa20.9■□□□□ 0.94
CTNS-203ENST00000399306 BTBD19C9JJ37 291 aa20.89■□□□□ 0.93
CTNS-203ENST00000399306 MTMR2Q13614 643 aa20.89■□□□□ 0.93
CTNS-203ENST00000399306 RNF20Q5VTR2 975 aa20.89■□□□□ 0.93
CTNS-203ENST00000399306 SIAH1Q8IUQ4 282 aa20.89■□□□□ 0.93
CTNS-203ENST00000399306 STK11IPQ8N1F8 1099 aa20.89■□□□□ 0.93
CTNS-203ENST00000399306 RNF186Q9NXI6 227 aa20.89■□□□□ 0.93
CTNS-203ENST00000399306 MTMR4Q9NYA4 1195 aa20.89■□□□□ 0.93
CTNS-203ENST00000399306 RANBP6O60518 1105 aaKnown RBP20.88■□□□□ 0.93
CTNS-203ENST00000399306 TTLL1O95922 423 aa20.88■□□□□ 0.93
CTNS-203ENST00000399306 HOXA7P31268 230 aaPredicted RBP20.88■□□□□ 0.93
CTNS-203ENST00000399306 HMGCS2P54868 508 aa20.88■□□□□ 0.93
CTNS-203ENST00000399306 GPAT2Q6NUI2 795 aa20.88■□□□□ 0.93
CTNS-203ENST00000399306 LPAR1Q92633 364 aa20.88■□□□□ 0.93
CTNS-203ENST00000399306 FEZ1Q99689 392 aa20.88■□□□□ 0.93
CTNS-203ENST00000399306 MYH4Q9Y623 1939 aa20.88■□□□□ 0.93
CTNS-203ENST00000399306 EEF2P13639 858 aaKnown RBP20.87■□□□□ 0.93
CTNS-203ENST00000399306 TRDNQ13061 729 aa20.87■□□□□ 0.93
CTNS-203ENST00000399306 TSGA10IPQ3SY00 556 aa20.87■□□□□ 0.93
CTNS-203ENST00000399306 ACER1Q8TDN7 264 aa20.87■□□□□ 0.93
CTNS-203ENST00000399306 CEP95Q96GE4 821 aa20.87■□□□□ 0.93
CTNS-203ENST00000399306 TTC14Q96N46 770 aa20.87■□□□□ 0.93
CTNS-203ENST00000399306 EMILIN3Q9NT22 766 aa20.87■□□□□ 0.93
CTNS-203ENST00000399306 PNMA3Q9UL41 463 aa20.87■□□□□ 0.93
CTNS-203ENST00000399306 NEDD4P46934 1319 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 A0A1W2PRG0 241 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 HSPA1AP0DMV8 641 aaKnown RBP20.86■□□□□ 0.93
CTNS-203ENST00000399306 HSPA1BP0DMV9 641 aaKnown RBP20.86■□□□□ 0.93
CTNS-203ENST00000399306 FAM47AQ5JRC9 791 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 GADL1Q6ZQY3 521 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 FAM43AQ8N2R8 423 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 MTA3Q9BTC8 594 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 VCPKMTQ9H867 229 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 INCENPQ9NQS7 918 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 TOMM22Q9NS69 142 aa20.86■□□□□ 0.93
CTNS-203ENST00000399306 E7EWF7 191 aa20.85■□□□□ 0.93
CTNS-203ENST00000399306 SLC27A2O14975 620 aa20.85■□□□□ 0.93
CTNS-203ENST00000399306 CREB3L3Q68CJ9 461 aa20.85■□□□□ 0.93
CTNS-203ENST00000399306 IQCA1Q86XH1 822 aa20.85■□□□□ 0.93
CTNS-203ENST00000399306 KCNB2Q92953 911 aa20.85■□□□□ 0.93
CTNS-203ENST00000399306 ZFYVE28Q9HCC9 887 aa20.85■□□□□ 0.93
CTNS-203ENST00000399306 GOPCQ9HD26 462 aa20.85■□□□□ 0.93
CTNS-203ENST00000399306 PDHXO00330 501 aa20.84■□□□□ 0.93
CTNS-203ENST00000399306 TRPA1O75762 1119 aa20.84■□□□□ 0.93
CTNS-203ENST00000399306 RRP12Q5JTH9 1297 aaKnown RBP20.84■□□□□ 0.93
CTNS-203ENST00000399306 DGKHQ86XP1 1220 aa20.84■□□□□ 0.93
CTNS-203ENST00000399306 NCOA7Q8NI08 942 aa20.84■□□□□ 0.93
CTNS-203ENST00000399306 PARK7Q99497 189 aaKnown RBP20.84■□□□□ 0.93
CTNS-203ENST00000399306 IL17RBQ9NRM6 502 aa20.84■□□□□ 0.93
CTNS-203ENST00000399306 ZKSCAN1P17029 563 aaPredicted RBP20.83■□□□□ 0.93
CTNS-203ENST00000399306 CTCFP49711 727 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms