RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 NHSQ6T4R5 1651 aa29.21■■■□□ 2.27
COL13A1-203ENST00000398969 ARHGAP29Q52LW3 1261 aa29.21■■■□□ 2.27
COL13A1-203ENST00000398969 SHISA4Q96DD7 197 aa29.21■■■□□ 2.27
COL13A1-203ENST00000398969 SRRTQ9BXP5 876 aaKnown RBP29.21■■■□□ 2.27
COL13A1-203ENST00000398969 CYP7A1P22680 504 aa29.2■■■□□ 2.27
COL13A1-203ENST00000398969 PARP3Q9Y6F1 533 aa29.2■■■□□ 2.27
COL13A1-203ENST00000398969 TNKSO95271 1327 aa29.2■■■□□ 2.27
COL13A1-203ENST00000398969 RTL9Q8NET4 1388 aa29.2■■■□□ 2.27
COL13A1-203ENST00000398969 STX10O60499 249 aa29.2■■■□□ 2.26
COL13A1-203ENST00000398969 SDR42E1Q8WUS8 393 aa29.2■■■□□ 2.26
COL13A1-203ENST00000398969 MINDY4BA8MYZ0 360 aa29.19■■■□□ 2.26
COL13A1-203ENST00000398969 URI1O94763 535 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-203ENST00000398969 PLCD1P51178 756 aa29.19■■■□□ 2.26
COL13A1-203ENST00000398969 SAMSN1Q9NSI8 373 aaKnown RBP29.19■■■□□ 2.26
COL13A1-203ENST00000398969 ANAPC4Q9UJX5 808 aa29.19■■■□□ 2.26
COL13A1-203ENST00000398969 ONECUT3O60422 494 aaPredicted RBP29.19■■■□□ 2.26
COL13A1-203ENST00000398969 CLCN6P51797 869 aa29.19■■■□□ 2.26
COL13A1-203ENST00000398969 CHRNDQ07001 517 aa29.19■■■□□ 2.26
COL13A1-203ENST00000398969 ESR2Q92731 530 aa29.19■■■□□ 2.26
COL13A1-203ENST00000398969 SLFN14P0C7P3 912 aa29.18■■■□□ 2.26
COL13A1-203ENST00000398969 ADKP55263 362 aaKnown RBP29.18■■■□□ 2.26
COL13A1-203ENST00000398969 PPP2R5BQ15173 497 aa29.18■■■□□ 2.26
COL13A1-203ENST00000398969 RC3H1Q5TC82 1133 aaKnown RBP29.18■■■□□ 2.26
COL13A1-203ENST00000398969 AEBP2Q6ZN18 517 aaPredicted RBP29.18■■■□□ 2.26
COL13A1-203ENST00000398969 AATFQ9NY61 560 aaKnown RBP eCLIP29.18■■■□□ 2.26
COL13A1-203ENST00000398969 MYH6P13533 1939 aa29.18■■■□□ 2.26
COL13A1-203ENST00000398969 GOLGA6L9A6NEM1 432 aa29.18■■■□□ 2.26
COL13A1-203ENST00000398969 FAM205CA6NFA0 338 aa29.18■■■□□ 2.26
COL13A1-203ENST00000398969 ERCC5P28715 1186 aaPredicted RBP29.18■■■□□ 2.26
COL13A1-203ENST00000398969 UBXN4Q92575 508 aa29.18■■■□□ 2.26
COL13A1-203ENST00000398969 RAI14Q9P0K7 980 aa29.18■■■□□ 2.26
COL13A1-203ENST00000398969 MNS1Q8NEH6 495 aa29.17■■■□□ 2.26
COL13A1-203ENST00000398969 VPS54Q9P1Q0 977 aa29.17■■■□□ 2.26
COL13A1-203ENST00000398969 TRIM75PA6NK02 468 aa29.17■■■□□ 2.26
COL13A1-203ENST00000398969 TADA3O75528 432 aa29.17■■■□□ 2.26
COL13A1-203ENST00000398969 AKAP17AQ02040 695 aaKnown RBP29.17■■■□□ 2.26
COL13A1-203ENST00000398969 NR1I3Q14994 352 aa29.17■■■□□ 2.26
COL13A1-203ENST00000398969 PKN1Q16512 942 aa29.17■■■□□ 2.26
COL13A1-203ENST00000398969 TOGARAM2Q6ZUX3 1019 aa29.17■■■□□ 2.26
COL13A1-203ENST00000398969 IQSEC3Q9UPP2 1182 aaPredicted RBP29.17■■■□□ 2.26
COL13A1-203ENST00000398969 SMIM22K7EJ46 135 aa29.16■■■□□ 2.26
COL13A1-203ENST00000398969 BMS1Q14692 1282 aaKnown RBP29.16■■■□□ 2.26
COL13A1-203ENST00000398969 TRPC5Q9UL62 973 aaPredicted RBP29.16■■■□□ 2.26
COL13A1-203ENST00000398969 A0A087X0B3 334 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 MAGEB6P1A0A0J9YX57 407 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 XBP1P17861 261 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 FAM177A1Q8N128 213 aaPredicted RBP29.15■■■□□ 2.26
COL13A1-203ENST00000398969 DHX58Q96C10 678 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 PHF20Q9BVI0 1012 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 CARD6Q9BX69 1037 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 CCNL1Q9UK58 526 aaPredicted RBP29.15■■■□□ 2.26
COL13A1-203ENST00000398969 A0A1B0GTH6 734 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 FUT2Q10981 343 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 EARS2Q5JPH6 523 aaKnown RBP29.15■■■□□ 2.26
COL13A1-203ENST00000398969 SMIM5Q71RC9 77 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 ZNF771Q7L3S4 317 aaPredicted RBP29.15■■■□□ 2.26
COL13A1-203ENST00000398969 ENAHQ8N8S7 591 aaPredicted RBP29.15■■■□□ 2.26
COL13A1-203ENST00000398969 ABCF2Q9UG63 623 aa29.15■■■□□ 2.26
COL13A1-203ENST00000398969 RPS6KA4O75676 772 aa29.14■■■□□ 2.26
COL13A1-203ENST00000398969 KRT2P35908 639 aa29.14■■■□□ 2.26
COL13A1-203ENST00000398969 TERF2Q15554 542 aa29.14■■■□□ 2.26
COL13A1-203ENST00000398969 ZSCAN10Q96SZ4 725 aaPredicted RBP29.14■■■□□ 2.26
COL13A1-203ENST00000398969 EFCAB8A8MWE9 144 aa29.14■■■□□ 2.25
COL13A1-203ENST00000398969 RGL2O15211 777 aa29.14■■■□□ 2.25
COL13A1-203ENST00000398969 EPSTI1Q96J88 318 aa29.14■■■□□ 2.25
COL13A1-203ENST00000398969 WDR24Q96S15 920 aa29.14■■■□□ 2.25
COL13A1-203ENST00000398969 FHOD1Q9Y613 1164 aa29.14■■■□□ 2.25
COL13A1-203ENST00000398969 LAMB2P55268 1798 aa29.13■■■□□ 2.25
COL13A1-203ENST00000398969 ZNF804BA4D1E1 1349 aa29.13■■■□□ 2.25
COL13A1-203ENST00000398969 DUOX1Q9NRD9 1551 aa29.13■■■□□ 2.25
COL13A1-203ENST00000398969 PRPF3O43395 683 aaKnown RBP29.13■■■□□ 2.25
COL13A1-203ENST00000398969 GNG11P61952 73 aa29.13■■■□□ 2.25
COL13A1-203ENST00000398969 CT47A1Q5JQC4 288 aaPredicted RBP29.13■■■□□ 2.25
COL13A1-203ENST00000398969 SH3RF1Q7Z6J0 888 aa29.13■■■□□ 2.25
COL13A1-203ENST00000398969 SEPT12Q8IYM1 358 aa29.13■■■□□ 2.25
COL13A1-203ENST00000398969 CCDC34Q96HJ3 373 aa29.13■■■□□ 2.25
COL13A1-203ENST00000398969 RIOK1Q9BRS2 568 aaKnown RBP29.13■■■□□ 2.25
COL13A1-203ENST00000398969 COL4A1P02462 1669 aa29.12■■■□□ 2.25
COL13A1-203ENST00000398969 PRDM1O75626 825 aa29.12■■■□□ 2.25
COL13A1-203ENST00000398969 CASQ1P31415 396 aa29.12■■■□□ 2.25
COL13A1-203ENST00000398969 APTXQ7Z2E3 356 aaKnown RBP29.11■■■□□ 2.25
COL13A1-203ENST00000398969 hCG_1642624A0A1W2PR95 340 aa29.11■■■□□ 2.25
COL13A1-203ENST00000398969 PLEKHA8P1O95397 391 aa29.11■■■□□ 2.25
COL13A1-203ENST00000398969 AFMP43652 599 aa29.11■■■□□ 2.25
COL13A1-203ENST00000398969 SYMPKQ92797 1274 aaKnown RBP29.11■■■□□ 2.25
COL13A1-203ENST00000398969 PAGE5Q96GU1 130 aa29.11■■■□□ 2.25
COL13A1-203ENST00000398969 ARGLU1Q9NWB6 273 aaPredicted RBP29.11■■■□□ 2.25
COL13A1-203ENST00000398969 NARFQ9UHQ1 456 aa29.11■■■□□ 2.25
COL13A1-203ENST00000398969 GNPATO15228 680 aa29.1■■■□□ 2.25
COL13A1-203ENST00000398969 IFIT1BQ5T764 474 aaKnown RBP29.1■■■□□ 2.25
COL13A1-203ENST00000398969 SPATA1Q5VX52 437 aa29.1■■■□□ 2.25
COL13A1-203ENST00000398969 CATIPQ7Z7H3 387 aa29.1■■■□□ 2.25
COL13A1-203ENST00000398969 V9GY48 417 aaPredicted RBP29.1■■■□□ 2.25
COL13A1-203ENST00000398969 SBF2Q86WG5 1849 aa29.1■■■□□ 2.25
COL13A1-203ENST00000398969 COL1A1P02452 1464 aaPredicted RBP29.1■■■□□ 2.25
COL13A1-203ENST00000398969 CD44P16070 742 aaKnown RBP29.1■■■□□ 2.25
COL13A1-203ENST00000398969 GYG1P46976 350 aa29.1■■■□□ 2.25
COL13A1-203ENST00000398969 MAP3K9P80192 1104 aa29.1■■■□□ 2.25
COL13A1-203ENST00000398969 CUL4BQ13620 913 aa29.1■■■□□ 2.25
COL13A1-203ENST00000398969 FERMT2Q96AC1 680 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms