RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 TMOD4Q9NZQ9 345 aa34.85■■■■□ 3.17
CHCHD4-202ENST00000396914 BTBD19C9JJ37 291 aa34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 RANBP6O60518 1105 aaKnown RBP34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 BACE1P56817 501 aa34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 ICA1Q05084 483 aa34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 FAM47AQ5JRC9 791 aa34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 MFSD6Q6ZSS7 791 aa34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 CLEC10AQ8IUN9 316 aa34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 FAM43AQ8N2R8 423 aa34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 U3KPZ7 1027 aaPredicted RBP34.84■■■■□ 3.17
CHCHD4-202ENST00000396914 FOXN1O15353 648 aa34.83■■■■□ 3.17
CHCHD4-202ENST00000396914 SAGE1Q9NXZ1 904 aa34.83■■■■□ 3.17
CHCHD4-202ENST00000396914 TSPY2A6NKD2 308 aa34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 TFAP4Q01664 338 aa34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 DGKZQ13574 1117 aa34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 AKNAD1Q5T1N1 836 aa34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 ACER1Q8TDN7 264 aa34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 RNF41Q9H4P4 317 aaPredicted RBP34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 KANSL2Q9H9L4 492 aa34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 ARHGEF10LQ9HCE6 1279 aa34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 DDX52Q9Y2R4 599 aaKnown RBP eCLIP34.82■■■■□ 3.17
CHCHD4-202ENST00000396914 C19orf81C9J6K1 198 aa34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 TBC1D8O95759 1140 aa34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 TBC1D10CQ8IV04 446 aa34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 GTF3C3Q9Y5Q9 886 aa34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 PDHXO00330 501 aa34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 TAF1CQ15572 869 aaPredicted RBP34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 USP17L2Q6R6M4 530 aa34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 ANKRD23Q86SG2 305 aa34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 TACC3Q9Y6A5 838 aa34.81■■■■□ 3.16
CHCHD4-202ENST00000396914 MOGSQ13724 837 aa34.8■■■■□ 3.16
CHCHD4-202ENST00000396914 PROCA1Q8NCQ7 364 aaPredicted RBP34.8■■■■□ 3.16
CHCHD4-202ENST00000396914 STAG1Q8WVM7 1258 aa34.8■■■■□ 3.16
CHCHD4-202ENST00000396914 NBPF3Q9H094 633 aa34.8■■■■□ 3.16
CHCHD4-202ENST00000396914 PTPRFP10586 1907 aa34.79■■■■□ 3.16
CHCHD4-202ENST00000396914 ORC4O43929 436 aa34.79■■■■□ 3.16
CHCHD4-202ENST00000396914 CTCFP49711 727 aaPredicted RBP34.79■■■■□ 3.16
CHCHD4-202ENST00000396914 MAP4K1Q92918 833 aa34.79■■■■□ 3.16
CHCHD4-202ENST00000396914 SH2D4AQ9H788 454 aa34.79■■■■□ 3.16
CHCHD4-202ENST00000396914 RBM8AQ9Y5S9 174 aaKnown RBP34.79■■■■□ 3.16
CHCHD4-202ENST00000396914 LAMA4Q16363 1823 aa34.79■■■■□ 3.16
CHCHD4-202ENST00000396914 EEF2P13639 858 aaKnown RBP34.78■■■■□ 3.16
CHCHD4-202ENST00000396914 USP14P54578 494 aa34.78■■■■□ 3.16
CHCHD4-202ENST00000396914 SH3D19Q5HYK7 790 aa34.78■■■■□ 3.16
CHCHD4-202ENST00000396914 GPAT2Q6NUI2 795 aa34.78■■■■□ 3.16
CHCHD4-202ENST00000396914 GNL3Q9BVP2 549 aaKnown RBP eCLIP34.78■■■■□ 3.16
CHCHD4-202ENST00000396914 LSG1Q9H089 658 aaKnown RBP34.78■■■■□ 3.16
CHCHD4-202ENST00000396914 RAD21O60216 631 aa34.77■■■■□ 3.16
CHCHD4-202ENST00000396914 PCP11498 1178 aaKnown RBP34.77■■■■□ 3.16
CHCHD4-202ENST00000396914 TREML2Q5T2D2 321 aa34.77■■■■□ 3.16
CHCHD4-202ENST00000396914 NEDD1Q8NHV4 660 aa34.77■■■■□ 3.16
CHCHD4-202ENST00000396914 KIAA1683Q9H0B3 1180 aa34.77■■■■□ 3.16
CHCHD4-202ENST00000396914 AGTPBP1Q9UPW5 1226 aa34.77■■■■□ 3.16
CHCHD4-202ENST00000396914 A0A1W2PRG0 241 aa34.76■■■■□ 3.16
CHCHD4-202ENST00000396914 CRHR2Q13324 411 aa34.76■■■■□ 3.16
CHCHD4-202ENST00000396914 ZFYVE28Q9HCC9 887 aa34.76■■■■□ 3.16
CHCHD4-202ENST00000396914 ZCCHC17Q9NP64 241 aaKnown RBP34.76■■■■□ 3.16
CHCHD4-202ENST00000396914 FGRP09769 529 aa34.75■■■■□ 3.15
CHCHD4-202ENST00000396914 CEP95Q96GE4 821 aa34.75■■■■□ 3.15
CHCHD4-202ENST00000396914 EMILIN3Q9NT22 766 aa34.75■■■■□ 3.15
CHCHD4-202ENST00000396914 NEDD4P46934 1319 aa34.75■■■■□ 3.15
CHCHD4-202ENST00000396914 HSPA8P11142 646 aaKnown RBP34.74■■■■□ 3.15
CHCHD4-202ENST00000396914 LBX1P52954 281 aa34.74■■■■□ 3.15
CHCHD4-202ENST00000396914 PABPC4Q13310 644 aaKnown RBP eCLIP34.74■■■■□ 3.15
CHCHD4-202ENST00000396914 ESR2Q92731 530 aa34.74■■■■□ 3.15
CHCHD4-202ENST00000396914 CLIP2Q9UDT6 1046 aa34.74■■■■□ 3.15
CHCHD4-202ENST00000396914 CYP21A2P08686 494 aa34.73■■■■□ 3.15
CHCHD4-202ENST00000396914 SIAH1Q8IUQ4 282 aa34.73■■■■□ 3.15
CHCHD4-202ENST00000396914 LOC285556D6RIA3 1793 aa34.73■■■■□ 3.15
CHCHD4-202ENST00000396914 PARK7Q99497 189 aaKnown RBP34.72■■■■□ 3.15
CHCHD4-202ENST00000396914 MTMR4Q9NYA4 1195 aa34.72■■■■□ 3.15
CHCHD4-202ENST00000396914 TMX2Q9Y320 296 aa34.72■■■■□ 3.15
CHCHD4-202ENST00000396914 R3HDMLQ9H3Y0 253 aa34.72■■■■□ 3.15
CHCHD4-202ENST00000396914 NYAP2Q9P242 653 aa34.72■■■■□ 3.15
CHCHD4-202ENST00000396914 PLIN4Q96Q06 1357 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 GREB1LQ9C091 1923 aaPredicted RBP34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 IGKV6D-41A0A0C4DH26 115 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 B4E1Z4 1266 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 TTLL1O95922 423 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 CYP2C8P10632 490 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 OSBPP22059 807 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 TRDNQ13061 729 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 KRT23Q9C075 422 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 CNNM2Q9H8M5 875 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 GOPCQ9HD26 462 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 PNMA3Q9UL41 463 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 STX8Q9UNK0 236 aa34.71■■■■□ 3.15
CHCHD4-202ENST00000396914 NMT2O60551 498 aa34.7■■■■□ 3.15
CHCHD4-202ENST00000396914 SLC45A1Q9Y2W3 748 aa34.7■■■■□ 3.15
CHCHD4-202ENST00000396914 KDM4AO75164 1064 aa34.69■■■■□ 3.14
CHCHD4-202ENST00000396914 IRX3P78415 501 aaPredicted RBP34.69■■■■□ 3.14
CHCHD4-202ENST00000396914 PPP4R3BQ5MIZ7 849 aa34.69■■■■□ 3.14
CHCHD4-202ENST00000396914 SPICE1Q8N0Z3 855 aa34.69■■■■□ 3.14
CHCHD4-202ENST00000396914 SMCR8Q8TEV9 937 aaPredicted RBP34.69■■■■□ 3.14
CHCHD4-202ENST00000396914 C12orf42Q96LP6 360 aa34.69■■■■□ 3.14
CHCHD4-202ENST00000396914 VCAM1P19320 739 aa34.68■■■■□ 3.14
CHCHD4-202ENST00000396914 CFHR5Q9BXR6 569 aa34.68■■■■□ 3.14
CHCHD4-202ENST00000396914 VCPKMTQ9H867 229 aa34.68■■■■□ 3.14
CHCHD4-202ENST00000396914 REC8O95072 547 aa34.67■■■■□ 3.14
CHCHD4-202ENST00000396914 IL17RBQ9NRM6 502 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms