RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 KLRG1Q96E93 195 aa11.58□□□□□ -0.56
DDX39B-202ENST00000396172 ZSCAN31Q96LW9 406 aaPredicted RBP11.58□□□□□ -0.56
DDX39B-202ENST00000396172 ARHGEF10LQ9HCE6 1279 aa11.58□□□□□ -0.56
DDX39B-202ENST00000396172 CSADQ9Y600 493 aa11.58□□□□□ -0.56
DDX39B-202ENST00000396172 IGKV6D-41A0A0C4DH26 115 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 PHF20L1A8MW92 1017 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 GH2P01242 217 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 TTLL12Q14166 644 aaPredicted RBP11.57□□□□□ -0.56
DDX39B-202ENST00000396172 CHST3Q7LGC8 479 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 SCYL3Q8IZE3 742 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 ENAHQ8N8S7 591 aaPredicted RBP11.57□□□□□ -0.56
DDX39B-202ENST00000396172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.57□□□□□ -0.561e-34■■□□□ 12.6
DDX39B-202ENST00000396172 RBM46Q8TBY0 533 aaKnown RBP11.57□□□□□ -0.56
DDX39B-202ENST00000396172 IGDCC4Q8TDY8 1250 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 BRF1Q92994 677 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 KAT14Q9H8E8 782 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 LY9Q9HBG7 655 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 AS3MTQ9HBK9 375 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 PICK1Q9NRD5 415 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 SH2B1Q9NRF2 756 aaPredicted RBP11.57□□□□□ -0.56
DDX39B-202ENST00000396172 STX8Q9UNK0 236 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 KIF3CO14782 793 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 CALM1P0DP23 149 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 CALM2P0DP24 149 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 CALM3P0DP25 149 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 TOP1P11387 765 aaKnown RBP11.57□□□□□ -0.56
DDX39B-202ENST00000396172 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 SEC23AQ15436 765 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 PRAMEF18Q5VWM3 479 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 CATIPQ7Z7H3 387 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 ANKRD13AQ8IZ07 590 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 ANKS1AQ92625 1134 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 CEP95Q96GE4 821 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 ZKSCAN3Q9BRR0 538 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 MTMR4Q9NYA4 1195 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 NYAP2Q9P242 653 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 LIMCH1Q9UPQ0 1083 aa11.57□□□□□ -0.56
DDX39B-202ENST00000396172 DDAH1O94760 285 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 TOMM70O94826 608 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 MAP3K9P80192 1104 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 TOB2Q14106 344 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-202ENST00000396172 RAB3GAP1Q15042 981 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 NFKBIBQ15653 356 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 SLC12A7Q9Y666 1083 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 K7ELQ4 463 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-202ENST00000396172 USP2O75604 605 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-202ENST00000396172 NOVP48745 357 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 EVCP57679 992 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 SEPT2Q15019 361 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 PPP2R5BQ15173 497 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 C2orf69Q8N8R5 385 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-202ENST00000396172 GBA2Q9HCG7 927 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-202ENST00000396172 IL17RBQ9NRM6 502 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 NID2Q14112 1375 aa11.56□□□□□ -0.56
DDX39B-202ENST00000396172 KLF18A0A0U1RQI7 1052 aa11.55□□□□□ -0.56
DDX39B-202ENST00000396172 USP17L5A8MUK1 530 aa11.55□□□□□ -0.56
DDX39B-202ENST00000396172 INPP5BP32019 993 aa11.55□□□□□ -0.56
DDX39B-202ENST00000396172 FSTL1Q12841 308 aa11.55□□□□□ -0.56
DDX39B-202ENST00000396172 MAP3K14Q99558 947 aa11.55□□□□□ -0.56
DDX39B-202ENST00000396172 ZNF408Q9H9D4 720 aa11.55□□□□□ -0.56
DDX39B-202ENST00000396172 GOLGA8BA8MQT2 603 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 TRAF5O00463 557 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 ZBTB43O43298 467 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 DHX16O60231 1041 aaKnown RBP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 NMT2O60551 498 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 CELF2O95319 508 aaKnown RBP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 APOBRQ0VD83 1088 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 RCSD1Q6JBY9 416 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 APOA5Q6Q788 366 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 ZNF654Q8IZM8 581 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 PNMA1Q8ND90 353 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 MKL1Q969V6 931 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 GOPCQ9HD26 462 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 RTN4Q9NQC3 1192 aaKnown RBP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 NAP1L2Q9ULW6 460 aaPredicted RBP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 CCDC196A0A1B0GTZ2 297 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 KIF5BP33176 963 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 ATP2B2Q01814 1243 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 PRKG1Q13976 671 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 VGLL4Q14135 290 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 FEZ1Q99689 392 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 TMEM47Q9BQJ4 181 aa11.54□□□□□ -0.56
DDX39B-202ENST00000396172 RBM28Q9NW13 759 aaKnown RBP11.54□□□□□ -0.56
DDX39B-202ENST00000396172 EEF2P13639 858 aaKnown RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 GUCY1A2P33402 732 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 METAP2P50579 478 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 USP14P54578 494 aa11.53□□□□□ -0.56
DDX39B-202ENST00000396172 COL9A3Q14050 684 aaPredicted RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 RRP1BQ14684 758 aaKnown RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 CPLX2Q6PUV4 134 aaKnown RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 NOL8Q76FK4 1167 aaKnown RBP11.53□□□□□ -0.56
DDX39B-202ENST00000396172 GMCL1P1Q8NEA9 526 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 660.8 ms