RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GDAP1L1Q96MZ0 367 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 MRPL46Q9H2W6 279 aaKnown RBP16.24■□□□□ 0.19
CCDC50-201ENST00000392455 MCM9Q9NXL9 1143 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 RIMBP2O15034 1052 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 TNNI2P48788 182 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 TTC25Q96NG3 672 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 CENPKQ9BS16 269 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 TRIM15Q9C019 465 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 PPME1Q9Y570 386 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 KRT12Q99456 494 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 MMEL1Q495T6 779 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 LMBR1LQ6UX01 489 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 PALM2Q8IXS6 379 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 LRRC43Q8N309 656 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 POLR3CQ9BUI4 534 aaPredicted RBP16.24■□□□□ 0.19
CCDC50-201ENST00000392455 RAB44Q7Z6P3 723 aaPredicted RBP16.24■□□□□ 0.19
CCDC50-201ENST00000392455 SPTLC2O15270 562 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 IL15P40933 162 aaPredicted RBP16.24■□□□□ 0.19
CCDC50-201ENST00000392455 GRIN1Q05586 938 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 DNM1Q05193 864 aaKnown RBP16.24■□□□□ 0.19
CCDC50-201ENST00000392455 DCUN1D2Q6PH85 259 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 CEP19Q96LK0 163 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 SPZ1Q9BXG8 430 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 DNAJC25Q9H1X3 360 aa16.24■□□□□ 0.19
CCDC50-201ENST00000392455 PNMA8AQ86V59 439 aaPredicted RBP16.23■□□□□ 0.19
CCDC50-201ENST00000392455 FAM186BQ8IYM0 893 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 KHDRBS2Q5VWX1 349 aaKnown RBP16.23■□□□□ 0.19
CCDC50-201ENST00000392455 DZIP3Q86Y13 1208 aaKnown RBP16.23■□□□□ 0.19
CCDC50-201ENST00000392455 NFKBIAP25963 317 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 PDE1AP54750 535 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 SP4Q02446 784 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 NUB1Q9Y5A7 615 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 ASIC2Q16515 512 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 CNPY4Q8N129 248 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 SLMAPQ14BN4 828 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 RABEP2Q9H5N1 569 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 APBA1Q02410 837 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 DIABLOQ9NR28 239 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
CCDC50-201ENST00000392455 RGS16O15492 202 aaPredicted RBP16.22■□□□□ 0.19
CCDC50-201ENST00000392455 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 STX2P32856 288 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 RASIP1Q5U651 963 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 CDKL2Q92772 493 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 NR1I2O75469 434 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 TBC1D8O95759 1140 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 RPS6KC1Q96S38 1066 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
CCDC50-201ENST00000392455 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
CCDC50-201ENST00000392455 BIRC3Q13489 604 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 RSAD2Q8WXG1 361 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 PLIN2Q99541 437 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 RHOXF2BP0C7M4 288 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 RHOXF2Q9BQY4 288 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 LRRC37BQ96QE4 947 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 MYH10P35580 1976 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 TYW5A2RUC4 315 aaKnown RBP16.22■□□□□ 0.19
CCDC50-201ENST00000392455 TMEM247A6NEH6 219 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 PPP1R2P3Q6NXS1 205 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 TMTC1Q8IUR5 882 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 DACT1Q9NYF0 836 aa16.22■□□□□ 0.19
CCDC50-201ENST00000392455 MAP3K10Q02779 954 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 SCOCQ9UIL1 159 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 M0QZ92 97 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 ZC3H12CQ9C0D7 883 aaKnown RBP16.21■□□□□ 0.19
CCDC50-201ENST00000392455 MED4Q9NPJ6 270 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 CDV3Q9UKY7 258 aaKnown RBP16.21■□□□□ 0.19
CCDC50-201ENST00000392455 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 SRGAP2BP0DMP2 458 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 DCAF17Q5H9S7 520 aaPredicted RBP16.21■□□□□ 0.19
CCDC50-201ENST00000392455 SLC13A4Q9UKG4 626 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 TYRO3Q06418 890 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 APOBRQ0VD83 1088 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.19
CCDC50-201ENST00000392455 KSR2Q6VAB6 950 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 ZBTB9Q96C00 473 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 TRPC6Q9Y210 931 aa16.21■□□□□ 0.19
CCDC50-201ENST00000392455 IPO5O00410 1097 aaKnown RBP16.21■□□□□ 0.18
CCDC50-201ENST00000392455 F13A1P00488 732 aa16.21■□□□□ 0.18
CCDC50-201ENST00000392455 LMOD1P29536 600 aaPredicted RBP16.21■□□□□ 0.18
CCDC50-201ENST00000392455 AKAP4Q5JQC9 854 aa16.21■□□□□ 0.18
CCDC50-201ENST00000392455 KLHDC4Q8TBB5 520 aa16.21■□□□□ 0.18
CCDC50-201ENST00000392455 GOLGA8KD6RF30 607 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 USP6NLQ92738 828 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 DDB1Q16531 1140 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 GFM2Q969S9 779 aaKnown RBP16.2■□□□□ 0.18
CCDC50-201ENST00000392455 DDX21Q9NR30 783 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCDC50-201ENST00000392455 RTCBQ9Y3I0 505 aaKnown RBP16.2■□□□□ 0.18
CCDC50-201ENST00000392455 STX17P56962 302 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 FAM160A1Q05DH4 1040 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
CCDC50-201ENST00000392455 LDHBP07195 334 aaKnown RBP16.2■□□□□ 0.18
CCDC50-201ENST00000392455 ZFXP17010 805 aaPredicted RBP16.2■□□□□ 0.18
CCDC50-201ENST00000392455 TMTC4Q5T4D3 741 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 FBXO41Q8TF61 875 aa16.2■□□□□ 0.18
CCDC50-201ENST00000392455 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms