RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 KBTBD3Q8NAB2 608 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 TSNARE1Q96NA8 513 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 NUCKS1Q9H1E3 243 aaKnown RBP21.92■■□□□ 1.1
SHANK1-203ENST00000391813 CLEC11AQ9Y240 323 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 GNA11P29992 359 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 NAPAP54920 295 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 WDR78Q5VTH9 848 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 KRT40Q6A162 431 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 FAM89AQ96GI7 184 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 BICC1Q9H694 974 aaKnown RBP21.92■■□□□ 1.1
SHANK1-203ENST00000391813 FAM204AQ9H8W3 233 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 CIB2O75838 187 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 PFKFB1P16118 471 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 PPP2R5BQ15173 497 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 LRCH2Q5VUJ6 765 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 ZNF274Q96GC6 653 aaPredicted RBP21.92■■□□□ 1.1
SHANK1-203ENST00000391813 TAB2Q9NYJ8 693 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 DENND2AQ9ULE3 1009 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 TCP1P17987 556 aaKnown RBP21.92■■□□□ 1.1
SHANK1-203ENST00000391813 RPL13P26373 211 aaKnown RBP21.92■■□□□ 1.1
SHANK1-203ENST00000391813 CLCN6P51797 869 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 RAPGEF1Q13905 1077 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 KRT71Q3SY84 523 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 GKAP1Q5VSY0 366 aaPredicted RBP21.92■■□□□ 1.1
SHANK1-203ENST00000391813 UNC5CLQ8IV45 518 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 ARHGAP24Q8N264 748 aa21.92■■□□□ 1.1
SHANK1-203ENST00000391813 EYA2O00167 538 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 NCBP1Q09161 790 aaKnown RBP21.91■■□□□ 1.1
SHANK1-203ENST00000391813 HS2ST1Q7LGA3 356 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 GSTA5Q7RTV2 222 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 SPATA31A3Q5VYP0 1347 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 FYB2Q5VWT5 728 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 RPAINQ86UA6 219 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 PLA2R1Q13018 1463 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 KIF3CO14782 793 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 ATP2A2P16615 1042 aaKnown RBP21.91■■□□□ 1.1
SHANK1-203ENST00000391813 PDE6BP35913 854 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 TNNI2P48788 182 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 AP1ARQ63HQ0 302 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 MPHOSPH6Q99547 160 aaKnown RBP21.91■■□□□ 1.1
SHANK1-203ENST00000391813 USP19O94966 1318 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 CCT5P48643 541 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 OTUD7BQ6GQQ9 843 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 FBXO38Q6PIJ6 1188 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 DESI2Q9BSY9 194 aa21.91■■□□□ 1.1
SHANK1-203ENST00000391813 IQGAP3Q86VI3 1631 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 LDHBP07195 334 aaKnown RBP21.9■■□□□ 1.1
SHANK1-203ENST00000391813 RXRAP19793 462 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 CLEC17AQ6ZS10 378 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 PNMA6AP0CW24 399 aaPredicted RBP21.9■■□□□ 1.1
SHANK1-203ENST00000391813 ALDH1B1P30837 517 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 SV2BQ7L1I2 683 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 IQSEC3Q9UPP2 1182 aaPredicted RBP21.9■■□□□ 1.1
SHANK1-203ENST00000391813 ADGRL3Q9HAR2 1447 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 IKBKBO14920 756 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 RASSF2P50749 326 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 TNNI3KQ59H18 835 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 TMEM87AQ8NBN3 555 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 CHAMP1Q96JM3 812 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 FPGT-TNNI3KV9GXZ4 949 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 PRR36Q9H6K5 1346 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 PDE4DQ08499 809 aa21.9■■□□□ 1.1
SHANK1-203ENST00000391813 ZNF174Q15697 407 aa21.89■■□□□ 1.1
SHANK1-203ENST00000391813 SSH3Q8TE77 659 aa21.89■■□□□ 1.1
SHANK1-203ENST00000391813 PPANQ9NQ55 473 aaKnown RBP21.89■■□□□ 1.1
SHANK1-203ENST00000391813 GGA1Q9UJY5 639 aa21.89■■□□□ 1.1
SHANK1-203ENST00000391813 TPCN1Q9ULQ1 816 aa21.89■■□□□ 1.1
SHANK1-203ENST00000391813 CERS3Q8IU89 383 aa21.89■■□□□ 1.09
SHANK1-203ENST00000391813 IFIH1Q9BYX4 1025 aaKnown RBP21.89■■□□□ 1.09
SHANK1-203ENST00000391813 STAP2Q9UGK3 403 aa21.89■■□□□ 1.09
SHANK1-203ENST00000391813 HYOU1Q9Y4L1 999 aa21.89■■□□□ 1.09
SHANK1-203ENST00000391813 MAST3O60307 1309 aa21.89■■□□□ 1.09
SHANK1-203ENST00000391813 TRAF5O00463 557 aa21.89■■□□□ 1.09
SHANK1-203ENST00000391813 RNF10Q8N5U6 811 aaKnown RBP21.89■■□□□ 1.09
SHANK1-203ENST00000391813 GDAP1L1Q96MZ0 367 aa21.89■■□□□ 1.09
SHANK1-203ENST00000391813 SNCBQ16143 134 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 KRT27Q7Z3Y8 459 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 NLGN1Q8N2Q7 840 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 APPBP2Q92624 585 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 DSCC1Q9BVC3 393 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 PFKFB2O60825 505 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 HIP1RO75146 1068 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 TSPY3P0CV98 308 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 TSPY8P0CW00 308 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 RPS6KA1Q15418 735 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 VCX3BQ9H321 246 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 TRMT44Q8IYL2 757 aaKnown RBP21.88■■□□□ 1.09
SHANK1-203ENST00000391813 ERBB3P21860 1342 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 F8W031 263 aaPredicted RBP21.88■■□□□ 1.09
SHANK1-203ENST00000391813 MIPOL1Q8TD10 442 aa21.88■■□□□ 1.09
SHANK1-203ENST00000391813 MYO1CO00159 1063 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 CEP104O60308 925 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 LUC7L3O95232 432 aaKnown RBP21.87■■□□□ 1.09
SHANK1-203ENST00000391813 ITGA6P23229 1130 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 ICE2Q659A1 982 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 IGSF1Q8N6C5 1336 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 MAGEB6P1A0A0J9YX57 407 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 UFL1O94874 794 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 TCIRG1Q13488 830 aa21.87■■□□□ 1.09
SHANK1-203ENST00000391813 PNOCQ13519 176 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms