RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 RASGRP4Q8TDF6 673 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 CYB5D2Q8WUJ1 264 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 FBXL18Q96ME1 805 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 BRMS1Q9HCU9 246 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 SEMA3GQ9NS98 782 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 IGSF5Q9NSI5 407 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 CAPN6Q9Y6Q1 641 aa4□□□□□ -1.77
RNU6-541P-201ENST00000384709 ETV3P41162 512 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 GJA8P48165 433 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 YARSP54577 528 aaKnown RBP3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 GP2P55259 537 aaKnown RBP3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 RAD51AP2Q09MP3 1159 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 SFRP5Q5T4F7 317 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 ZNF654Q8IZM8 581 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 RBBP8NLQ8NC74 664 aaPredicted RBP3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 PIWIL2Q8TC59 973 aaKnown RBP3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 NKD1Q969G9 470 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 MIPEPQ99797 713 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 SPON2Q9BUD6 331 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 CNNM2Q9H8M5 875 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 PAK6Q9NQU5 681 aaPredicted RBP3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 PRDM5Q9NQX1 630 aaPredicted RBP3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 ST14Q9Y5Y6 855 aa3.99□□□□□ -1.77
RNU6-541P-201ENST00000384709 UPK3BL1B0FP48 263 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 CHURC1-FNTBB4DL54 471 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 UPK3BL2E5RIL1 263 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 TNFRSF10CO14798 259 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 RGS13O14921 159 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 SRFP11831 508 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 CYP7A1P22680 504 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 CCNFP41002 786 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 COL9A2Q14055 689 aaPredicted RBP3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 ZNF394Q53GI3 561 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 INTS3Q68E01 1043 aaKnown RBP3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 SPRED2Q7Z698 418 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 THAP5Q7Z6K1 395 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 TAB3Q8N5C8 712 aaPredicted RBP3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 FAM13CQ8NE31 585 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 SPATA32Q96LK8 384 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 Q96M66 194 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 LRRC4CQ9HCJ2 640 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 UBP1Q9NZI7 540 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 GMIPQ9P107 970 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 ADGRE2Q9UHX3 823 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 ZNRF3Q9ULT6 936 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 SLC5A6Q9Y289 635 aa3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 OAS3Q9Y6K5 1087 aaKnown RBP3.98□□□□□ -1.77
RNU6-541P-201ENST00000384709 PITPNM2Q9BZ72 1349 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 PRR33A8MZF0 331 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 TLR3O15455 904 aaKnown RBP3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 GRIN3BO60391 1043 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 CD8BP10966 210 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 FUT4P22083 530 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 SOX9P48436 509 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 ZNF165P49910 485 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 CLCQ05315 142 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 APOBRQ0VD83 1088 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 MLECQ14165 292 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 LRRFIP1Q32MZ4 808 aaKnown RBP3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 CDH24Q86UP0 819 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 FAM181AQ8N9Y4 354 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 AGBL5Q8NDL9 886 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 RNF141Q8WVD5 230 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 ASB11Q8WXH4 323 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 HRASLS5Q96KN8 279 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 CCDC74BQ96LY2 380 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 TGIF2Q9GZN2 237 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 LMCD1Q9NZU5 365 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 PCDHB14Q9Y5E9 798 aa3.97□□□□□ -1.77
RNU6-541P-201ENST00000384709 GNAT3A8MTJ3 354 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 IMPDH2P12268 514 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 NME1P15531 152 aaKnown RBP3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 TNK2Q07912 1038 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 SEZ6Q53EL9 994 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 NT5DC4Q86YG4 428 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 MFSD4AQ8N468 514 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 ATG4CQ96DT6 458 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 DPH2Q9BQC3 489 aaPredicted RBP3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 ASPNQ9BXN1 380 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 GPR62Q9BZJ7 368 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 PCDHGB7Q9Y5F8 929 aa3.96□□□□□ -1.78
RNU6-541P-201ENST00000384709 UBOX5O94941 541 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 ITGB5P18084 799 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 BNIP3Q12983 259 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 PAK2Q13177 524 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 AOC3Q16853 763 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 GAB4Q2WGN9 574 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 OVOS1Q6IE37 1185 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 NLRC3Q7RTR2 1065 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 ABI1Q8IZP0 508 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 DTWD2Q8NBA8 298 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 FLCNQ8NFG4 579 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 BAHD1Q8TBE0 780 aaPredicted RBP3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 TMEM40Q8WWA1 233 aa3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 DUSP15Q9H1R2 295 aaPredicted RBP3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 TPX2Q9ULW0 747 aaKnown RBP3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 ANGEL1Q9UNK9 670 aaKnown RBP3.95□□□□□ -1.78
RNU6-541P-201ENST00000384709 ZNF281Q9Y2X9 895 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms