RNA–Protein interactions for RNA: ENST00000382862.7

MSLN-201, Transcript of mesothelin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MSLN, Length 2,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-201ENST00000382862 PNMA1Q8ND90 353 aa23.32■■□□□ 1.32
MSLN-201ENST00000382862 ZBED3Q96IU2 234 aaPredicted RBP23.32■■□□□ 1.32
MSLN-201ENST00000382862 C8orf76Q96K31 380 aa23.32■■□□□ 1.32
MSLN-201ENST00000382862 TMEM47Q9BQJ4 181 aa23.32■■□□□ 1.32
MSLN-201ENST00000382862 ALG1Q9BT22 464 aa23.32■■□□□ 1.32
MSLN-201ENST00000382862 SCAF8Q9UPN6 1271 aaKnown RBP23.32■■□□□ 1.32
MSLN-201ENST00000382862 hCG_1642624A0A1W2PR95 340 aa23.32■■□□□ 1.32
MSLN-201ENST00000382862 FZD9O00144 591 aa23.32■■□□□ 1.32
MSLN-201ENST00000382862 HLA-DOAP06340 250 aa23.32■■□□□ 1.32
MSLN-201ENST00000382862 ZSCAN29Q8IWY8 852 aaPredicted RBP23.32■■□□□ 1.32
MSLN-201ENST00000382862 CRACR2BQ8N4Y2 399 aaPredicted RBP23.32■■□□□ 1.32
MSLN-201ENST00000382862 KAT14Q9H8E8 782 aa23.32■■□□□ 1.32
MSLN-201ENST00000382862 CNTNAP1P78357 1384 aa23.31■■□□□ 1.32
MSLN-201ENST00000382862 PLIN4Q96Q06 1357 aa23.31■■□□□ 1.32
MSLN-201ENST00000382862 GOLGA6L22H0YM25 854 aa23.31■■□□□ 1.32
MSLN-201ENST00000382862 NPM3O75607 178 aaKnown RBP23.31■■□□□ 1.32
MSLN-201ENST00000382862 FBXO18Q8NFZ0 1043 aa23.31■■□□□ 1.32
MSLN-201ENST00000382862 EHD4Q9H223 541 aa23.31■■□□□ 1.32
MSLN-201ENST00000382862 MTMR7Q9Y216 660 aa23.31■■□□□ 1.32
MSLN-201ENST00000382862 KIF3AQ9Y496 699 aa23.31■■□□□ 1.32
MSLN-201ENST00000382862 FIBPO43427 364 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 GADD45BO75293 160 aaPredicted RBP23.3■■□□□ 1.32
MSLN-201ENST00000382862 SSRP1Q08945 709 aaKnown RBP23.3■■□□□ 1.32
MSLN-201ENST00000382862 SPDYE2Q495Y8 402 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 CPLX2Q6PUV4 134 aaKnown RBP23.3■■□□□ 1.32
MSLN-201ENST00000382862 USP48Q86UV5 1035 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 SHISA4Q96DD7 197 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 SYT17Q9BSW7 474 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 STK36Q9NRP7 1315 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 ATRNL1Q5VV63 1379 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 KIF28PB7ZC32 967 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 NCLP19338 710 aaKnown RBP23.3■■□□□ 1.32
MSLN-201ENST00000382862 TMTC3Q6ZXV5 915 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 STAG2Q8N3U4 1231 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 SRBD1Q8N5C6 995 aaKnown RBP23.3■■□□□ 1.32
MSLN-201ENST00000382862 GJA3Q9Y6H8 435 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 MYH4Q9Y623 1939 aa23.3■■□□□ 1.32
MSLN-201ENST00000382862 IGKV6D-41A0A0C4DH26 115 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 WNT10BO00744 389 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 ENTPD3O75355 529 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 NT5C2P49902 561 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 GMPSP49915 693 aaPredicted RBP23.29■■□□□ 1.32
MSLN-201ENST00000382862 EIF6P56537 245 aaKnown RBP23.29■■□□□ 1.32
MSLN-201ENST00000382862 ARHGAP27Q6ZUM4 889 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 GPT2Q8TD30 523 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 DHX36Q9H2U1 1008 aaKnown RBP23.29■■□□□ 1.32
MSLN-201ENST00000382862 MYOZ2Q9NPC6 264 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 SWAP70Q9UH65 585 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 PDIA4P13667 645 aaKnown RBP23.29■■□□□ 1.32
MSLN-201ENST00000382862 TNIP1Q15025 636 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 SLC35G1Q2M3R5 365 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 MTMR14Q8NCE2 650 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 VEZTQ9HBM0 779 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 PI4KBQ9UBF8 816 aa23.29■■□□□ 1.32
MSLN-201ENST00000382862 CNTNAP5Q8WYK1 1306 aa23.28■■□□□ 1.32
MSLN-201ENST00000382862 CCDC196A0A1B0GTZ2 297 aa23.28■■□□□ 1.32
MSLN-201ENST00000382862 NOVP48745 357 aa23.28■■□□□ 1.32
MSLN-201ENST00000382862 FTOQ9C0B1 505 aaKnown RBP eCLIP23.28■■□□□ 1.32
MSLN-201ENST00000382862 CALM1P0DP23 149 aa23.27■■□□□ 1.32
MSLN-201ENST00000382862 CALM2P0DP24 149 aa23.27■■□□□ 1.32
MSLN-201ENST00000382862 CALM3P0DP25 149 aa23.27■■□□□ 1.32
MSLN-201ENST00000382862 RRP1BQ14684 758 aaKnown RBP23.27■■□□□ 1.32
MSLN-201ENST00000382862 PKN1Q16512 942 aa23.27■■□□□ 1.32
MSLN-201ENST00000382862 KRT40Q6A162 431 aa23.27■■□□□ 1.32
MSLN-201ENST00000382862 GZF1Q9H116 711 aaPredicted RBP23.27■■□□□ 1.32
MSLN-201ENST00000382862 TFIP11Q9UBB9 837 aaKnown RBP23.27■■□□□ 1.32
MSLN-201ENST00000382862 ATP6V1DQ9Y5K8 247 aa23.27■■□□□ 1.32
MSLN-201ENST00000382862 ASTN2O75129 1339 aaPredicted RBP23.27■■□□□ 1.32
MSLN-201ENST00000382862 YBX3P16989 372 aaKnown RBP eCLIP23.27■■□□□ 1.32
MSLN-201ENST00000382862 RBM26Q5T8P6 1007 aaKnown RBP23.27■■□□□ 1.32
MSLN-201ENST00000382862 MTMR4Q9NYA4 1195 aa23.27■■□□□ 1.32
MSLN-201ENST00000382862 MAD2L2Q9UI95 211 aa23.27■■□□□ 1.32
MSLN-201ENST00000382862 COL2A1P02458 1487 aaPredicted RBP23.27■■□□□ 1.32
MSLN-201ENST00000382862 JAG1P78504 1218 aa23.26■■□□□ 1.31
MSLN-201ENST00000382862 SAMD7Q7Z3H4 446 aa23.26■■□□□ 1.31
MSLN-201ENST00000382862 CTCFLQ8NI51 663 aaPredicted RBP23.26■■□□□ 1.31
MSLN-201ENST00000382862 CSRNP1Q96S65 589 aa23.26■■□□□ 1.31
MSLN-201ENST00000382862 TMEM39BQ9GZU3 492 aa23.26■■□□□ 1.31
MSLN-201ENST00000382862 RBM28Q9NW13 759 aaKnown RBP23.26■■□□□ 1.31
MSLN-201ENST00000382862 VEGFAP15692 232 aaPredicted RBP23.26■■□□□ 1.31
MSLN-201ENST00000382862 ZNF280AP59817 542 aaPredicted RBP23.26■■□□□ 1.31
MSLN-201ENST00000382862 TPRNQ4KMQ1 711 aa23.26■■□□□ 1.31
MSLN-201ENST00000382862 MICALL2Q8IY33 904 aa23.26■■□□□ 1.31
MSLN-201ENST00000382862 LRRC47Q8N1G4 583 aaKnown RBP23.26■■□□□ 1.31
MSLN-201ENST00000382862 TMEM87AQ8NBN3 555 aa23.26■■□□□ 1.31
MSLN-201ENST00000382862 MPHOSPH10O00566 681 aaKnown RBP23.25■■□□□ 1.31
MSLN-201ENST00000382862 GOLGA8HP0CJ92 632 aa23.25■■□□□ 1.31
MSLN-201ENST00000382862 GRM4Q14833 912 aa23.25■■□□□ 1.31
MSLN-201ENST00000382862 CCDC178Q5BJE1 867 aa23.25■■□□□ 1.31
MSLN-201ENST00000382862 CPVLQ9H3G5 476 aa23.25■■□□□ 1.31
MSLN-201ENST00000382862 TMOD2Q9NZR1 351 aa23.25■■□□□ 1.31
MSLN-201ENST00000382862 DDX49Q9Y6V7 483 aaKnown RBP23.25■■□□□ 1.31
MSLN-201ENST00000382862 GDF11O95390 407 aa23.24■■□□□ 1.31
MSLN-201ENST00000382862 KIF23Q02241 960 aaPredicted RBP23.24■■□□□ 1.31
MSLN-201ENST00000382862 PPP2R5BQ15173 497 aa23.24■■□□□ 1.31
MSLN-201ENST00000382862 TATDN1Q6P1N9 297 aa23.24■■□□□ 1.31
MSLN-201ENST00000382862 METTL16Q86W50 562 aaKnown RBP23.24■■□□□ 1.31
MSLN-201ENST00000382862 TRIM22Q8IYM9 498 aa23.24■■□□□ 1.31
MSLN-201ENST00000382862 PIBF1Q8WXW3 757 aa23.24■■□□□ 1.31
MSLN-201ENST00000382862 RNF26Q9BY78 433 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms