RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 CEP95Q96GE4 821 aa23.92■■□□□ 1.42
TSSC4-203ENST00000380996 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.92■■□□□ 1.42
TSSC4-203ENST00000380996 MTMR4Q9NYA4 1195 aa23.92■■□□□ 1.42
TSSC4-203ENST00000380996 SIPA1L1O43166 1804 aa23.92■■□□□ 1.42
TSSC4-203ENST00000380996 IGKV6D-41A0A0C4DH26 115 aa23.91■■□□□ 1.42
TSSC4-203ENST00000380996 CALM1P0DP23 149 aa23.91■■□□□ 1.42
TSSC4-203ENST00000380996 CALM2P0DP24 149 aa23.91■■□□□ 1.42
TSSC4-203ENST00000380996 CALM3P0DP25 149 aa23.91■■□□□ 1.42
TSSC4-203ENST00000380996 ZNF654Q8IZM8 581 aa23.91■■□□□ 1.42
TSSC4-203ENST00000380996 KANSL2Q9H9L4 492 aa23.91■■□□□ 1.42
TSSC4-203ENST00000380996 NOVP48745 357 aa23.9■■□□□ 1.42
TSSC4-203ENST00000380996 METAP2P50579 478 aaKnown RBP eCLIP23.9■■□□□ 1.42
TSSC4-203ENST00000380996 DDAH1O94760 285 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 GDF11O95390 407 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 TTLL1O95922 423 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 TOP1P11387 765 aaKnown RBP23.89■■□□□ 1.42
TSSC4-203ENST00000380996 CCT2P78371 535 aaKnown RBP23.89■■□□□ 1.42
TSSC4-203ENST00000380996 SCRN1Q12765 414 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 PPP2R5BQ15173 497 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 MICU3Q86XE3 530 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 ZNF341Q9BYN7 854 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 RRAGCQ9HB90 399 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 CWC22Q9HCG8 908 aaKnown RBP23.89■■□□□ 1.42
TSSC4-203ENST00000380996 FOXD4L1Q9NU39 408 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 HPS5Q9UPZ3 1129 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 CLEC11AQ9Y240 323 aa23.89■■□□□ 1.42
TSSC4-203ENST00000380996 GOLGA8AA7E2F4 631 aa23.89■■□□□ 1.41
TSSC4-203ENST00000380996 GH2P01242 217 aa23.89■■□□□ 1.41
TSSC4-203ENST00000380996 TMEM47Q9BQJ4 181 aa23.89■■□□□ 1.41
TSSC4-203ENST00000380996 GINM1Q9NU53 330 aa23.89■■□□□ 1.41
TSSC4-203ENST00000380996 CCDC196A0A1B0GTZ2 297 aa23.88■■□□□ 1.41
TSSC4-203ENST00000380996 CAP2P40123 477 aa23.88■■□□□ 1.41
TSSC4-203ENST00000380996 PRAMEF18Q5VWM3 479 aa23.88■■□□□ 1.41
TSSC4-203ENST00000380996 CDC37L1Q7L3B6 337 aa23.88■■□□□ 1.41
TSSC4-203ENST00000380996 PNMA1Q8ND90 353 aa23.88■■□□□ 1.41
TSSC4-203ENST00000380996 NUP133Q8WUM0 1156 aa23.88■■□□□ 1.41
TSSC4-203ENST00000380996 LLPHQ9BRT6 129 aaKnown RBP23.88■■□□□ 1.41
TSSC4-203ENST00000380996 ADM5C9JUS6 153 aa23.87■■□□□ 1.41
TSSC4-203ENST00000380996 CPLX1O14810 134 aa23.87■■□□□ 1.41
TSSC4-203ENST00000380996 CPLX2Q6PUV4 134 aaKnown RBP23.87■■□□□ 1.41
TSSC4-203ENST00000380996 USP48Q86UV5 1035 aa23.87■■□□□ 1.41
TSSC4-203ENST00000380996 NYAP2Q9P242 653 aa23.87■■□□□ 1.41
TSSC4-203ENST00000380996 CLIP2Q9UDT6 1046 aa23.87■■□□□ 1.41
TSSC4-203ENST00000380996 PHF20L1A8MW92 1017 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 CTNND1O60716 968 aaKnown RBP23.86■■□□□ 1.41
TSSC4-203ENST00000380996 ASNSP08243 561 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 NF2P35240 595 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 ICA1Q05084 483 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 ST3GAL1Q11201 340 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 TROAPQ12815 778 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 RRP1BQ14684 758 aaKnown RBP23.86■■□□□ 1.41
TSSC4-203ENST00000380996 SEPT2Q15019 361 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 RAB3GAP1Q15042 981 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 RTN1Q16799 776 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 RAB11FIP4Q86YS3 637 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 FANCBQ8NB91 859 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 MAP3K14Q99558 947 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 MYL10Q9BUA6 226 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 NCOA5Q9HCD5 579 aaKnown RBP23.86■■□□□ 1.41
TSSC4-203ENST00000380996 ZBTB21Q9ULJ3 1066 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 SMC3Q9UQE7 1217 aa23.86■■□□□ 1.41
TSSC4-203ENST00000380996 NID2Q14112 1375 aa23.85■■□□□ 1.41
TSSC4-203ENST00000380996 RBM28Q9NW13 759 aaKnown RBP23.85■■□□□ 1.41
TSSC4-203ENST00000380996 MYH8P13535 1937 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 CDKL5O76039 1030 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 RXRAP19793 462 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 GUCY1A2P33402 732 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 ATP2B2Q01814 1243 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 CTCFLQ8NI51 663 aaPredicted RBP23.84■■□□□ 1.41
TSSC4-203ENST00000380996 MKL1Q969V6 931 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 ZNF112Q9UJU3 913 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 KIF5BP33176 963 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 CCDC144CPQ8IYA2 1237 aa23.84■■□□□ 1.41
TSSC4-203ENST00000380996 PPP1R12BO60237 982 aaPredicted RBP23.83■■□□□ 1.41
TSSC4-203ENST00000380996 EEF2P13639 858 aaKnown RBP23.83■■□□□ 1.41
TSSC4-203ENST00000380996 JAG1P78504 1218 aa23.83■■□□□ 1.41
TSSC4-203ENST00000380996 SHROOM1Q2M3G4 852 aaPredicted RBP23.83■■□□□ 1.41
TSSC4-203ENST00000380996 LDHDQ86WU2 507 aa23.83■■□□□ 1.41
TSSC4-203ENST00000380996 CDCA5Q96FF9 252 aa23.83■■□□□ 1.41
TSSC4-203ENST00000380996 SYNPO2Q9UMS6 1093 aa23.83■■□□□ 1.41
TSSC4-203ENST00000380996 ADD1P35611 737 aaKnown RBP23.82■■□□□ 1.4
TSSC4-203ENST00000380996 HMGN5P82970 282 aaKnown RBP23.82■■□□□ 1.4
TSSC4-203ENST00000380996 CLEC10AQ8IUN9 316 aa23.82■■□□□ 1.4
TSSC4-203ENST00000380996 ZNF784Q8NCA9 323 aaPredicted RBP23.82■■□□□ 1.4
TSSC4-203ENST00000380996 WRNIP1Q96S55 665 aa23.82■■□□□ 1.4
TSSC4-203ENST00000380996 GLIS2Q9BZE0 524 aaPredicted RBP23.82■■□□□ 1.4
TSSC4-203ENST00000380996 ARHGEF10LQ9HCE6 1279 aa23.82■■□□□ 1.4
TSSC4-203ENST00000380996 CDC27P30260 824 aa23.81■■□□□ 1.4
TSSC4-203ENST00000380996 NSUN7Q8NE18 718 aaKnown RBP23.81■■□□□ 1.4
TSSC4-203ENST00000380996 ZNF526Q8TF50 670 aaPredicted RBP23.81■■□□□ 1.4
TSSC4-203ENST00000380996 KLRG1Q96E93 195 aa23.81■■□□□ 1.4
TSSC4-203ENST00000380996 NMRK2Q9NPI5 230 aa23.81■■□□□ 1.4
TSSC4-203ENST00000380996 FAM217BQ9NTX9 383 aaPredicted RBP23.81■■□□□ 1.4
TSSC4-203ENST00000380996 KIF3AQ9Y496 699 aa23.81■■□□□ 1.4
TSSC4-203ENST00000380996 POTEIP0CG38 1075 aa23.8■■□□□ 1.4
TSSC4-203ENST00000380996 POTEJP0CG39 1038 aa23.8■■□□□ 1.4
TSSC4-203ENST00000380996 GJB2P29033 226 aa23.8■■□□□ 1.4
TSSC4-203ENST00000380996 GNAQP50148 359 aa23.8■■□□□ 1.4
TSSC4-203ENST00000380996 LRRC47Q8N1G4 583 aaKnown RBP23.8■■□□□ 1.4
TSSC4-203ENST00000380996 SMARCC2Q8TAQ2 1214 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms