RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 ALG1Q9BT22 464 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 DHX36Q9H2U1 1008 aaKnown RBP16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 FAM217BQ9NTX9 383 aaPredicted RBP16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 CD2APQ9Y5K6 639 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 BRCA1P38398 1863 aaKnown RBP16■□□□□ 0.15
TNFSF13-203ENST00000380535 SCN9AQ15858 1988 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 GNAQP50148 359 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 TFAP4Q01664 338 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 HS1BP3Q53T59 392 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 STK11IPQ8N1F8 1099 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 KAT14Q9H8E8 782 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 SENP2Q9HC62 589 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
TNFSF13-203ENST00000380535 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
TNFSF13-203ENST00000380535 PRDM1O75626 825 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 LETM1O95202 739 aaPredicted RBP16■□□□□ 0.15
TNFSF13-203ENST00000380535 EHD4Q9H223 541 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 PLIN4Q96Q06 1357 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 MYH8P13535 1937 aa16■□□□□ 0.15
TNFSF13-203ENST00000380535 CDK8P49336 464 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 DALRD3Q5D0E6 543 aaKnown RBP15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 FAM177A1Q8N128 213 aaPredicted RBP15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 CRACR2BQ8N4Y2 399 aaPredicted RBP15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 NEDD1Q8NHV4 660 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 NUP133Q8WUM0 1156 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 SPATA32Q96LK8 384 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 IDI2Q9BXS1 227 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 HDAC9Q9UKV0 1011 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 MYH6P13533 1939 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 F8W031 263 aaPredicted RBP15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 RASA1P20936 1047 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 TROAPQ12815 778 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 SAFBQ15424 915 aaKnown RBP eCLIP15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 CCDC183Q5T5S1 534 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 APOBEC3HQ6NTF7 200 aaKnown RBP15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 CDC42EP5Q6NZY7 148 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 SLC26A6Q9BXS9 759 aa15.99■□□□□ 0.15
TNFSF13-203ENST00000380535 WDHD1O75717 1129 aaPredicted RBP15.98■□□□□ 0.15
TNFSF13-203ENST00000380535 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
TNFSF13-203ENST00000380535 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
TNFSF13-203ENST00000380535 OSBPL5Q9H0X9 879 aaPredicted RBP15.98■□□□□ 0.15
TNFSF13-203ENST00000380535 SAP30BPQ9UHR5 308 aaKnown RBP15.98■□□□□ 0.15
TNFSF13-203ENST00000380535 GOLGA6L4A6NEF3 574 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 PLCD1P51178 756 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 MYL10Q9BUA6 226 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 TFIP11Q9UBB9 837 aaKnown RBP15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 FER1L6Q2WGJ9 1857 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 ZBTB7AO95365 584 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 RXRAP19793 462 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 SCNN1DP51172 638 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 FAM47AQ5JRC9 791 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 RAB11FIP4Q86YS3 637 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 NIM1KQ8IY84 436 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 LEO1Q8WVC0 666 aaPredicted RBP15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 DYNLL2Q96FJ2 89 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
TNFSF13-203ENST00000380535 ENTPD3O75355 529 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 PSEN1P49768 467 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 GABPAQ06546 454 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 TMTC3Q6ZXV5 915 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 NBPF11Q86T75 865 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 KIAA0825Q8IV33 1275 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 SERPINB13Q9UIV8 391 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 ZNRF3Q9ULT6 936 aa15.96■□□□□ 0.15
TNFSF13-203ENST00000380535 PPFIA3O75145 1194 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 MSNP26038 577 aaKnown RBP15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 NOVP48745 357 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 KIF23Q02241 960 aaPredicted RBP15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 GNL2Q13823 731 aaKnown RBP15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 KRT40Q6A162 431 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 RCSD1Q6JBY9 416 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 AGBL3Q8NEM8 1001 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 PHKBQ93100 1093 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 TSPY26PQ9H489 355 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 TMOD2Q9NZR1 351 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 RCOR1Q9UKL0 485 aa15.96■□□□□ 0.14
TNFSF13-203ENST00000380535 LTBP3Q9NS15 1303 aa15.95■□□□□ 0.14
TNFSF13-203ENST00000380535 YEATS4O95619 227 aa15.95■□□□□ 0.14
TNFSF13-203ENST00000380535 SMARCA1P28370 1054 aa15.95■□□□□ 0.14
TNFSF13-203ENST00000380535 RBM5P52756 815 aaKnown RBP eCLIP15.95■□□□□ 0.14
TNFSF13-203ENST00000380535 PNMA1Q8ND90 353 aa15.95■□□□□ 0.14
TNFSF13-203ENST00000380535 RTEL1Q9NZ71 1219 aa15.95■□□□□ 0.14
TNFSF13-203ENST00000380535 SMIM22K7EJ46 135 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 TOP1P11387 765 aaKnown RBP15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 PICALMQ13492 652 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 GRM4Q14833 912 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 OGFOD1Q8N543 542 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 MXD3Q9BW11 206 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 POLR3EQ9NVU0 708 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 ATF5Q9Y2D1 282 aaPredicted RBP15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 ADAMTSL1Q8N6G6 1762 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 YDJCA8MPS7 323 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 U2AF2P26368 475 aaKnown RBP eCLIP15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 FOXP4Q8IVH2 680 aaPredicted RBP15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 TAOK3Q9H2K8 898 aa15.94■□□□□ 0.14
TNFSF13-203ENST00000380535 FOXP1Q9H334 677 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms