RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 IL1RAPL2Q9NP60 686 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 GALNT8Q9NY28 637 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 CDC42BPGQ6DT37 1551 aa10.5□□□□□ -0.73
PTPRA-204ENST00000380393 KDRP35968 1356 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 ABCC4O15439 1325 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 CTAGE15A4D2H0 777 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 ATP6V1G2O95670 118 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 NBPF7P0C2Y1 421 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-204ENST00000380393 CTAGE8P0CG41 777 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 XBP1P17861 261 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 RHBDL3P58872 404 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 CTAGE6Q86UF2 777 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 CTAGE4Q8IX94 777 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 OSBPL1AQ9BXW6 950 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 UBA5Q9GZZ9 404 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 A6NHS1 94 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 F8VZ95 297 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 GOLGA8FQ08AF8 430 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 GOLGA8DPQ0D2H9 430 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 WHAMMP3Q1A5X7 153 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.49□□□□□ -0.73
PTPRA-204ENST00000380393 C2CD2Q9Y426 696 aa10.49□□□□□ -0.73
PTPRA-204ENST00000380393 ATP2C2O75185 946 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 VIL1P09327 827 aaKnown RBP10.48□□□□□ -0.73
PTPRA-204ENST00000380393 RPL13P26373 211 aaKnown RBP10.48□□□□□ -0.73
PTPRA-204ENST00000380393 CCDC92Q53HC0 331 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-204ENST00000380393 SPECC1Q5M775 1068 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 COG1Q8WTW3 980 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 JAKMIP1Q96N16 626 aaKnown RBP10.48□□□□□ -0.73
PTPRA-204ENST00000380393 ADGRB2O60241 1585 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 LRRD1A4D1F6 860 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 ARHGAP6O43182 974 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 POLE2P56282 527 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 CUL4BQ13620 913 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 MSL1Q68DK7 614 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 IQCF2Q8IXL9 164 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 SLAIN2Q9P270 581 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 CEP126Q9P2H0 1117 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 IQSEC3Q9UPP2 1182 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-204ENST00000380393 FRMD4BQ9Y2L6 1034 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 L3MBTL1Q9Y468 752 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 C1orf167Q5SNV9 1468 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 RASSF10A6NK89 507 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 MGRN1O60291 552 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 INHBCP55103 352 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 TSNAXIP1Q2TAA8 658 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 SYNE3Q6ZMZ3 975 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 ZNF473Q8WTR7 871 aaKnown RBP10.48□□□□□ -0.73
PTPRA-204ENST00000380393 LEO1Q8WVC0 666 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-204ENST00000380393 RMDN2Q96LZ7 410 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 PREBQ9HCU5 417 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 LIMCH1Q9UPQ0 1083 aa10.48□□□□□ -0.73
PTPRA-204ENST00000380393 A6NNZ2 444 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 DIAPH2O60879 1101 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 LUC7L3O95232 432 aaKnown RBP10.47□□□□□ -0.73
PTPRA-204ENST00000380393 ZC3H6P61129 1189 aaKnown RBP10.47□□□□□ -0.73
PTPRA-204ENST00000380393 DYNC1I2Q13409 638 aaKnown RBP10.47□□□□□ -0.73
PTPRA-204ENST00000380393 TUBB8Q3ZCM7 444 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 WHAMMQ8TF30 809 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 SH3GL2Q99962 352 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 PCMTD2Q9NV79 361 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 TTC21AQ8NDW8 1320 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 ZC3H4Q9UPT8 1303 aaKnown RBP10.47□□□□□ -0.73
PTPRA-204ENST00000380393 LRRC7Q96NW7 1537 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 PDLIM1O00151 329 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 CEP104O60308 925 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 PIP4K2BP78356 416 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 MECOMQ03112 1051 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 ADCY1Q08828 1119 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 BRINP3Q76B58 766 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 ATRIPQ8WXE1 791 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 TRIM11Q96F44 468 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.47□□□□□ -0.734e-7■■□□□ 14.2
PTPRA-204ENST00000380393 ZWILCHQ9H900 591 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 NOP53Q9NZM5 478 aaKnown RBP10.47□□□□□ -0.73
PTPRA-204ENST00000380393 BZW2Q9Y6E2 419 aaKnown RBP10.47□□□□□ -0.73
PTPRA-204ENST00000380393 MAP3K19Q56UN5 1328 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 AK2P54819 239 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 UNC5CLQ8IV45 518 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 MAIP1Q8WWC4 291 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 PAGR1Q9BTK6 254 aa10.47□□□□□ -0.73
PTPRA-204ENST00000380393 DPPA5A6NC42 116 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 AGPSO00116 658 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 GNAQP50148 359 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 ATP1A2P50993 1020 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 CCDC38Q502W7 563 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 LARP1BQ659C4 914 aaKnown RBP10.46□□□□□ -0.73
PTPRA-204ENST00000380393 HIBCHQ6NVY1 386 aaPredicted RBP10.46□□□□□ -0.73
PTPRA-204ENST00000380393 NECAB1Q8N987 351 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 ATP11CQ8NB49 1132 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 NLRP2Q9NX02 1062 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 UBAP1Q9NZ09 502 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 PHF24Q9UPV7 400 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 KRT38O76015 456 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 TFRCP02786 760 aaKnown RBP10.46□□□□□ -0.73
PTPRA-204ENST00000380393 NOA1Q8NC60 698 aaKnown RBP10.46□□□□□ -0.73
PTPRA-204ENST00000380393 KCNN1Q92952 543 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 CORO1BQ9BR76 489 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 WDR35Q9P2L0 1181 aa10.46□□□□□ -0.73
PTPRA-204ENST00000380393 SYNPO2Q9UMS6 1093 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms