RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 LARP1BQ659C4 914 aaKnown RBP28.63■■■□□ 2.17
ECHDC3-201ENST00000379215 RAB11FIP4Q86YS3 637 aa28.63■■■□□ 2.17
ECHDC3-201ENST00000379215 CTCFLQ8NI51 663 aaPredicted RBP28.63■■■□□ 2.17
ECHDC3-201ENST00000379215 MYH8P13535 1937 aa28.62■■■□□ 2.17
ECHDC3-201ENST00000379215 TOP1P11387 765 aaKnown RBP28.62■■■□□ 2.17
ECHDC3-201ENST00000379215 KIF5BP33176 963 aa28.62■■■□□ 2.17
ECHDC3-201ENST00000379215 RGS22Q8NE09 1264 aa28.62■■■□□ 2.17
ECHDC3-201ENST00000379215 IGKV6D-41A0A0C4DH26 115 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 EGFRP00533 1210 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 RXRAP19793 462 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 PNMA1Q8ND90 353 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 CEP95Q96GE4 821 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 STK36Q9NRP7 1315 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 IFNAR1P17181 557 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 CDC27P30260 824 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 ADD1P35611 737 aaKnown RBP28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 DDX11Q96FC9 970 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 ADARB2Q9NS39 739 aaKnown RBP28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 FAM217BQ9NTX9 383 aaPredicted RBP28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 MTMR4Q9NYA4 1195 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 HACL1Q9UJ83 578 aa28.61■■■□□ 2.17
ECHDC3-201ENST00000379215 DDNO94850 711 aaPredicted RBP28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 TTLL1O95922 423 aa28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 RASA3Q14644 834 aa28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 TMEM179Q6ZVK1 233 aa28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 CCDC144CPQ8IYA2 1237 aa28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 TNPO1Q92973 898 aaKnown RBP28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 GBP4Q96PP9 640 aa28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 TMEM47Q9BQJ4 181 aa28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 TMEM39BQ9GZU3 492 aa28.6■■■□□ 2.17
ECHDC3-201ENST00000379215 MPHOSPH10O00566 681 aaKnown RBP28.59■■■□□ 2.17
ECHDC3-201ENST00000379215 TRIM22Q8IYM9 498 aa28.59■■■□□ 2.17
ECHDC3-201ENST00000379215 HOOK2Q96ED9 719 aa28.59■■■□□ 2.17
ECHDC3-201ENST00000379215 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.59■■■□□ 2.17
ECHDC3-201ENST00000379215 ORC3Q9UBD5 711 aaPredicted RBP28.59■■■□□ 2.17
ECHDC3-201ENST00000379215 GNAQP50148 359 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 PKP1Q13835 747 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 NTRK3Q16288 839 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 WASF1Q92558 559 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 L3MBTL3Q96JM7 780 aaPredicted RBP28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 PPP2R3BQ9Y5P8 575 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 ZSCAN22P10073 491 aaPredicted RBP28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 ABCB5Q2M3G0 1257 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 KANSL2Q9H9L4 492 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 CABP5Q9NP86 173 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 PGAP2Q9UHJ9 254 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 ATP6V1DQ9Y5K8 247 aa28.58■■■□□ 2.17
ECHDC3-201ENST00000379215 PITPNM2Q9BZ72 1349 aa28.57■■■□□ 2.16
ECHDC3-201ENST00000379215 EPS15P42566 896 aa28.57■■■□□ 2.16
ECHDC3-201ENST00000379215 MAP3K10Q02779 954 aa28.57■■■□□ 2.16
ECHDC3-201ENST00000379215 SSRP1Q08945 709 aaKnown RBP28.57■■■□□ 2.16
ECHDC3-201ENST00000379215 TRPM4Q8TD43 1214 aa28.57■■■□□ 2.16
ECHDC3-201ENST00000379215 ZDHHC9Q9Y397 364 aa28.57■■■□□ 2.16
ECHDC3-201ENST00000379215 GREB1LQ9C091 1923 aaPredicted RBP28.56■■■□□ 2.16
ECHDC3-201ENST00000379215 H3BQV1 296 aa28.56■■■□□ 2.16
ECHDC3-201ENST00000379215 FMNL1O95466 1100 aaPredicted RBP28.56■■■□□ 2.16
ECHDC3-201ENST00000379215 IFFO2Q5TF58 517 aa28.56■■■□□ 2.16
ECHDC3-201ENST00000379215 CLEC17AQ6ZS10 378 aa28.56■■■□□ 2.16
ECHDC3-201ENST00000379215 FAM196BA6NMK8 535 aa28.55■■■□□ 2.16
ECHDC3-201ENST00000379215 GRM4Q14833 912 aa28.55■■■□□ 2.16
ECHDC3-201ENST00000379215 LZTS2Q9BRK4 669 aa28.55■■■□□ 2.16
ECHDC3-201ENST00000379215 DEFB129Q9H1M3 183 aa28.55■■■□□ 2.16
ECHDC3-201ENST00000379215 MTMR6Q9Y217 621 aa28.55■■■□□ 2.16
ECHDC3-201ENST00000379215 VPS37CA5D8V6 355 aaPredicted RBP28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 ANGEL2Q5VTE6 544 aaKnown RBP28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 TMTC3Q6ZXV5 915 aa28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 RNF26Q9BY78 433 aaPredicted RBP28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 RBM27Q9P2N5 1060 aaKnown RBP28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 FDPSP14324 419 aaKnown RBP28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 AKAP17AQ02040 695 aaKnown RBP28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 NYAP2Q9P242 653 aa28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 SYNPO2Q9UMS6 1093 aa28.54■■■□□ 2.16
ECHDC3-201ENST00000379215 TEPSINQ96N21 525 aa28.53■■■□□ 2.16
ECHDC3-201ENST00000379215 SLC26A6Q9BXS9 759 aa28.53■■■□□ 2.16
ECHDC3-201ENST00000379215 DEXIO95424 95 aa28.52■■■□□ 2.16
ECHDC3-201ENST00000379215 F13A1P00488 732 aa28.52■■■□□ 2.16
ECHDC3-201ENST00000379215 DCAF15Q66K64 600 aa28.52■■■□□ 2.16
ECHDC3-201ENST00000379215 GINM1Q9NU53 330 aa28.52■■■□□ 2.16
ECHDC3-201ENST00000379215 GGA3Q9NZ52 723 aa28.52■■■□□ 2.16
ECHDC3-201ENST00000379215 GLTPD2A6NH11 291 aa28.51■■■□□ 2.15
ECHDC3-201ENST00000379215 ICA1Q05084 483 aa28.51■■■□□ 2.15
ECHDC3-201ENST00000379215 PHKBQ93100 1093 aa28.51■■■□□ 2.15
ECHDC3-201ENST00000379215 MKL1Q969V6 931 aa28.51■■■□□ 2.15
ECHDC3-201ENST00000379215 C8orf76Q96K31 380 aa28.51■■■□□ 2.15
ECHDC3-201ENST00000379215 CLIP2Q9UDT6 1046 aa28.51■■■□□ 2.15
ECHDC3-201ENST00000379215 NBPF11Q86T75 865 aa28.51■■■□□ 2.15
ECHDC3-201ENST00000379215 ASTN2O75129 1339 aaPredicted RBP28.5■■■□□ 2.15
ECHDC3-201ENST00000379215 GDF11O95390 407 aa28.5■■■□□ 2.15
ECHDC3-201ENST00000379215 PARP1P09874 1014 aaKnown RBP28.5■■■□□ 2.15
ECHDC3-201ENST00000379215 USP50Q70EL3 339 aaPredicted RBP28.5■■■□□ 2.15
ECHDC3-201ENST00000379215 ALG1Q9BT22 464 aa28.5■■■□□ 2.15
ECHDC3-201ENST00000379215 IQCA1LA6NCM1 817 aa28.49■■■□□ 2.15
ECHDC3-201ENST00000379215 GOLGA6L22H0YM25 854 aa28.49■■■□□ 2.15
ECHDC3-201ENST00000379215 PRPF3O43395 683 aaKnown RBP28.49■■■□□ 2.15
ECHDC3-201ENST00000379215 GH2P01242 217 aa28.49■■■□□ 2.15
ECHDC3-201ENST00000379215 SLURP2P0DP57 97 aa28.49■■■□□ 2.15
ECHDC3-201ENST00000379215 HIRAP54198 1017 aaPredicted RBP28.49■■■□□ 2.15
ECHDC3-201ENST00000379215 TRIM29Q14134 588 aa28.49■■■□□ 2.15
ECHDC3-201ENST00000379215 NFKBIBQ15653 356 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms