RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 KIRREL3Q8IZU9 778 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 ZNF512BQ96KM6 892 aaPredicted RBP17.54■□□□□ 0.4
FXN-201ENST00000377270 PRC1O43663 620 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 IDH1O75874 414 aaKnown RBP17.54■□□□□ 0.4
FXN-201ENST00000377270 PHKA1P46020 1223 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 TTF1Q15361 905 aaPredicted RBP17.54■□□□□ 0.4
FXN-201ENST00000377270 CCDC102BQ68D86 513 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 ZNF396Q96N95 335 aaPredicted RBP17.54■□□□□ 0.4
FXN-201ENST00000377270 DNAI1Q9UI46 699 aa17.54■□□□□ 0.4
FXN-201ENST00000377270 OATP04181 439 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 ADD2P35612 726 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 ZRSR2Q15696 482 aaKnown RBP17.53■□□□□ 0.4
FXN-201ENST00000377270 DDB1Q16531 1140 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 PIH1D3Q9NQM4 214 aaKnown RBP17.53■□□□□ 0.4
FXN-201ENST00000377270 BLOC1S6Q9UL45 172 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 NUP98P52948 1817 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 GUCY1B3Q02153 619 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 ISM2Q6H9L7 571 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 FBXL16Q8N461 479 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 CNNM3Q8NE01 707 aa17.53■□□□□ 0.4
FXN-201ENST00000377270 EVCP57679 992 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
FXN-201ENST00000377270 RALYLQ86SE5 291 aaKnown RBP17.52■□□□□ 0.4
FXN-201ENST00000377270 NCOA7Q8NI08 942 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 ANO10Q9NW15 660 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 SALL1Q9NSC2 1324 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 ANKRD36CQ5JPF3 1778 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 SFPQP23246 707 aaKnown RBP eCLIP17.52■□□□□ 0.4
FXN-201ENST00000377270 ADD1P35611 737 aaKnown RBP17.52■□□□□ 0.4
FXN-201ENST00000377270 PRPHP41219 470 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 MYSM1Q5VVJ2 828 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 ARMCX5Q6P1M9 558 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 MYLK4Q86YV6 388 aaPredicted RBP17.52■□□□□ 0.4
FXN-201ENST00000377270 MB21D2Q8IYB1 491 aaPredicted RBP17.52■□□□□ 0.4
FXN-201ENST00000377270 CLIC6Q96NY7 704 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 CCDC87Q9NVE4 849 aa17.52■□□□□ 0.4
FXN-201ENST00000377270 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.39
FXN-201ENST00000377270 MYH3P11055 1940 aa17.52■□□□□ 0.39
FXN-201ENST00000377270 PUM3Q15397 648 aaKnown RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 LPIN2Q92539 896 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 CARD6Q9BX69 1037 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 FAM169AQ9Y6X4 670 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 NWD2Q9ULI1 1742 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 COL16A1Q07092 1604 aaPredicted RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 N4BP1O75113 896 aaKnown RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 CDKL5O76039 1030 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 LONRF2Q1L5Z9 754 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 CDCA7Q9BWT1 371 aaPredicted RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 MROH5Q6ZUA9 1318 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 KLF18A0A0U1RQI7 1052 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 URI1O94763 535 aaPredicted RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 UQCRFS1P1P0C7P4 283 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 PYGBP11216 843 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 FDPSP14324 419 aaKnown RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 PAX3P23760 479 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 WLSQ5T9L3 541 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 CEP57L1Q8IYX8 460 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 AOPEPQ8N6M6 819 aa17.51■□□□□ 0.39
FXN-201ENST00000377270 GPR161Q8N6U8 529 aaKnown RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 SPDYE1Q8NFV5 336 aaPredicted RBP17.51■□□□□ 0.39
FXN-201ENST00000377270 FTOQ9C0B1 505 aaKnown RBP eCLIP17.51■□□□□ 0.39
FXN-201ENST00000377270 AKAP11Q9UKA4 1901 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 SPATA31A1Q5TZJ5 1347 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 ZNF532Q9HCE3 1301 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 ENO4A6NNW6 628 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 MAP2K7O14733 419 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 INPP5BP32019 993 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 ANTXR2P58335 489 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 UBE3CQ15386 1083 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 SNAP23O00161 211 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 NAA25Q14CX7 972 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 RAB11FIP4Q86YS3 637 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 MSL3Q8N5Y2 521 aaKnown RBP17.5■□□□□ 0.39
FXN-201ENST00000377270 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
FXN-201ENST00000377270 SEC31BQ9NQW1 1179 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.5■□□□□ 0.39
FXN-201ENST00000377270 PLCH1Q4KWH8 1693 aa17.5■□□□□ 0.39
FXN-201ENST00000377270 GOLGA8BA8MQT2 603 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 MYO1FO00160 1098 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 PDE6AP16499 860 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 FGFR2P21802 821 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 MCM6Q14566 821 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 NAT10Q9H0A0 1025 aaKnown RBP17.49■□□□□ 0.39
FXN-201ENST00000377270 RCOR1Q9UKL0 485 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 CAPN7Q9Y6W3 813 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 DOT1LQ8TEK3 1739 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 LOC102724428A0A0B4J2F2 783 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 IMPDH2P12268 514 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 SIK1P57059 783 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 TRIM65Q6PJ69 517 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 TMC6Q7Z403 805 aa17.49■□□□□ 0.39
FXN-201ENST00000377270 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms