RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 BAG1Q99933 345 aaPredicted RBP12.19□□□□□ -0.46
ABCF1-202ENST00000376545 UBAC1Q9BSL1 405 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 RBM28Q9NW13 759 aaKnown RBP12.19□□□□□ -0.46
ABCF1-202ENST00000376545 DNAI1Q9UI46 699 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 ZBTB22O15209 634 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 SLFN14P0C7P3 912 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 GOLGA8FQ08AF8 430 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 GOLGA8DPQ0D2H9 430 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 UBE4AQ14139 1066 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 ZNF384Q8TF68 577 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 SDR42E1Q8WUS8 393 aa12.19□□□□□ -0.46
ABCF1-202ENST00000376545 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
ABCF1-202ENST00000376545 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 TADA3O75528 432 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 BMP15O95972 392 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 ITPK1Q13572 414 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 FERMT2Q96AC1 680 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 TRIM75PA6NK02 468 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 SMIM22K7EJ46 135 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 ZRANB2O95218 330 aaKnown RBP eCLIP12.18□□□□□ -0.46
ABCF1-202ENST00000376545 KRT2P35908 639 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 MAP3K9P80192 1104 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 DPYDQ12882 1025 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 SF3B3Q15393 1217 aaKnown RBP12.18□□□□□ -0.46
ABCF1-202ENST00000376545 CDKAL1Q5VV42 579 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 SAMSN1Q9NSI8 373 aaKnown RBP12.18□□□□□ -0.46
ABCF1-202ENST00000376545 RAI14Q9P0K7 980 aa12.18□□□□□ -0.46
ABCF1-202ENST00000376545 PDS5AQ29RF7 1337 aaKnown RBP12.18□□□□□ -0.46
ABCF1-202ENST00000376545 FAM205CA6NFA0 338 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 EFCAB8A8MWE9 144 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 SEMA3EO15041 775 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 XBP1P17861 261 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 FAM193AP78312 1265 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 NUP133Q8WUM0 1156 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 KIFC2Q96AC6 838 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 PAGE5Q96GU1 130 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 PANX2Q96RD6 677 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 TOMM22Q9NS69 142 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
ABCF1-202ENST00000376545 FHOD1Q9Y613 1164 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 VGLL3A8MV65 326 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 DDAH1O94760 285 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 CALM1P0DP23 149 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 CALM2P0DP24 149 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 CALM3P0DP25 149 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 FECHP22830 423 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 PTPN21Q16825 1174 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 ZNF827Q17R98 1081 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 SPATA1Q5VX52 437 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 GSDMAQ96QA5 445 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 BSDC1Q9NW68 430 aaPredicted RBP12.17□□□□□ -0.46
ABCF1-202ENST00000376545 THRAP3Q9Y2W1 955 aaKnown RBP12.17□□□□□ -0.46
ABCF1-202ENST00000376545 LOC102724428A0A0B4J2F2 783 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 WNT7AO00755 349 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
ABCF1-202ENST00000376545 CLCN6P51797 869 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 SIK1P57059 783 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 CLEC4GQ6UXB4 293 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 EPSTI1Q96J88 318 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 VPS54Q9P1Q0 977 aa12.17□□□□□ -0.46
ABCF1-202ENST00000376545 NIP7Q9Y221 180 aaKnown RBP eCLIP12.17□□□□□ -0.46
ABCF1-202ENST00000376545 CCDC88AQ3V6T2 1871 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 PPP1R3GB7ZBB8 358 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 ATP2C1P98194 919 aaPredicted RBP12.16□□□□□ -0.46
ABCF1-202ENST00000376545 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
ABCF1-202ENST00000376545 TOGARAM2Q6ZUX3 1019 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 TMTC3Q6ZXV5 915 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 TRMT44Q8IYL2 757 aaKnown RBP12.16□□□□□ -0.46
ABCF1-202ENST00000376545 ADD3Q9UEY8 706 aaKnown RBP12.16□□□□□ -0.46
ABCF1-202ENST00000376545 COL24A1Q17RW2 1714 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 CNTNAP5Q8WYK1 1306 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 RGL2O15211 777 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 ORC4O43929 436 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 PLEKHA8P1O95397 391 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
ABCF1-202ENST00000376545 TERF2Q15554 542 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 E2F4Q16254 413 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 CTR9Q6PD62 1173 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 SYMPKQ92797 1274 aaKnown RBP12.16□□□□□ -0.46
ABCF1-202ENST00000376545 GNL3LQ9NVN8 582 aaKnown RBP12.16□□□□□ -0.46
ABCF1-202ENST00000376545 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
ABCF1-202ENST00000376545 CDK11BP21127 795 aaKnown RBP12.15□□□□□ -0.46
ABCF1-202ENST00000376545 ADKP55263 362 aaKnown RBP12.15□□□□□ -0.46
ABCF1-202ENST00000376545 ARHGAP29Q52LW3 1261 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 IFIT1BQ5T764 474 aaKnown RBP12.15□□□□□ -0.46
ABCF1-202ENST00000376545 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 MRFAP1Q9Y605 127 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 TPM1P09493 284 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 GYG1P46976 350 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 RSRC2Q7L4I2 434 aaKnown RBP12.15□□□□□ -0.46
ABCF1-202ENST00000376545 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 PDILTQ8N807 584 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 FAM84BQ96KN1 310 aaPredicted RBP12.15□□□□□ -0.46
ABCF1-202ENST00000376545 WDR24Q96S15 920 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms