RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GYG1P46976 350 aa16.58■□□□□ 0.25
MSH5-201ENST00000375703 A0A087X0B3 334 aa16.58■□□□□ 0.24
MSH5-201ENST00000375703 EFCAB8A8MWE9 144 aa16.58■□□□□ 0.24
MSH5-201ENST00000375703 TERF2Q15554 542 aa16.58■□□□□ 0.24
MSH5-201ENST00000375703 CT47A1Q5JQC4 288 aaPredicted RBP16.58■□□□□ 0.24
MSH5-201ENST00000375703 PAGE5Q96GU1 130 aa16.58■□□□□ 0.24
MSH5-201ENST00000375703 ARGLU1Q9NWB6 273 aaPredicted RBP16.58■□□□□ 0.24
MSH5-201ENST00000375703 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 FUT2Q10981 343 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 SPATA1Q5VX52 437 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 KLHL10Q6JEL2 608 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 WDR24Q96S15 920 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 RIOK1Q9BRS2 568 aaKnown RBP16.57■□□□□ 0.24
MSH5-201ENST00000375703 CYP2D7A0A087X1C5 515 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 TADA3O75528 432 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 PLEKHA8P1O95397 391 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 TPM1P09493 284 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 DYNLL1P63167 89 aaKnown RBP16.57■□□□□ 0.24
MSH5-201ENST00000375703 IQCA1Q86XH1 822 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 SYMPKQ92797 1274 aaKnown RBP16.57■□□□□ 0.24
MSH5-201ENST00000375703 FERMT2Q96AC1 680 aa16.57■□□□□ 0.24
MSH5-201ENST00000375703 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
MSH5-201ENST00000375703 RBM28Q9NW13 759 aaKnown RBP16.57■□□□□ 0.24
MSH5-201ENST00000375703 AKR1B15C9JRZ8 316 aaPredicted RBP16.56■□□□□ 0.24
MSH5-201ENST00000375703 TEX33O43247 280 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 STX17P56962 302 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 ZNF174Q15697 407 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 BRMS1Q9HCU9 246 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 FHOD1Q9Y613 1164 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 BCORQ6W2J9 1755 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 BMP15O95972 392 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
MSH5-201ENST00000375703 CASP1P29466 404 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 TMCO3Q6UWJ1 677 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 SH3RF1Q7Z6J0 888 aa16.56■□□□□ 0.24
MSH5-201ENST00000375703 WTIPA6NIX2 430 aaPredicted RBP16.55■□□□□ 0.24
MSH5-201ENST00000375703 CALM1P0DP23 149 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 CALM2P0DP24 149 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 CALM3P0DP25 149 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 TROAPQ12815 778 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 CAVIN4Q5BKX8 364 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 PPFIBP1Q86W92 1011 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 ACSBG1Q96GR2 724 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 GSDMAQ96QA5 445 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 DESI2Q9BSY9 194 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
MSH5-201ENST00000375703 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 WNT7AO00755 349 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 SIK1P57059 783 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 DPYDQ12882 1025 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 CUL4BQ13620 913 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 APTXQ7Z2E3 356 aaKnown RBP16.54■□□□□ 0.24
MSH5-201ENST00000375703 ANKRD18AQ8IVF6 992 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 CPLX3Q8WVH0 158 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 PANX2Q96RD6 677 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 PNMA6AP0CW24 399 aaPredicted RBP16.54■□□□□ 0.24
MSH5-201ENST00000375703 RBL2Q08999 1139 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 UBE4AQ14139 1066 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 KARSQ15046 597 aaKnown RBP16.54■□□□□ 0.24
MSH5-201ENST00000375703 IGSF22Q8N9C0 903 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 CTAGE1Q96RT6 745 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 SYNRGQ9UMZ2 1314 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 MTF1Q14872 753 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
MSH5-201ENST00000375703 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 ST7Q9NRC1 585 aa16.54■□□□□ 0.24
MSH5-201ENST00000375703 ZRANB2O95218 330 aaKnown RBP eCLIP16.53■□□□□ 0.24
MSH5-201ENST00000375703 CCDC175P0C221 793 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 PTGDRQ13258 359 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 ITPK1Q13572 414 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 FILIP1LQ4L180 1135 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 SMYD4Q8IYR2 804 aaPredicted RBP16.53■□□□□ 0.24
MSH5-201ENST00000375703 ADD3Q9UEY8 706 aaKnown RBP16.53■□□□□ 0.24
MSH5-201ENST00000375703 MRFAP1Q9Y605 127 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 SOWAHDA6NJG2 315 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 PPP1R3GB7ZBB8 358 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 USP17L21D6R901 530 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 FGRP09769 529 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 PCP11498 1178 aaKnown RBP16.53■□□□□ 0.24
MSH5-201ENST00000375703 PPP2R3AQ06190 1150 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 TMTC3Q6ZXV5 915 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 STAMQ92783 540 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 KIFC2Q96AC6 838 aa16.53■□□□□ 0.24
MSH5-201ENST00000375703 DDAH1O94760 285 aa16.52■□□□□ 0.24
MSH5-201ENST00000375703 CDKAL1Q5VV42 579 aa16.52■□□□□ 0.24
MSH5-201ENST00000375703 TNFRSF25Q93038 417 aa16.52■□□□□ 0.24
MSH5-201ENST00000375703 EPC1Q9H2F5 836 aa16.52■□□□□ 0.24
MSH5-201ENST00000375703 NPY5RQ15761 445 aa16.52■□□□□ 0.23
MSH5-201ENST00000375703 GPR161Q8N6U8 529 aaKnown RBP16.52■□□□□ 0.23
MSH5-201ENST00000375703 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.23
MSH5-201ENST00000375703 FAM84BQ96KN1 310 aaPredicted RBP16.52■□□□□ 0.23
MSH5-201ENST00000375703 NAA15Q9BXJ9 866 aaKnown RBP16.52■□□□□ 0.23
MSH5-201ENST00000375703 MRPL44Q9H9J2 332 aaKnown RBP16.52■□□□□ 0.23
MSH5-201ENST00000375703 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.23
MSH5-201ENST00000375703 ZNF652Q9Y2D9 606 aa16.52■□□□□ 0.23
MSH5-201ENST00000375703 SEMA3EO15041 775 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms