RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MAGI3Q5TCQ9 1506 aa6.86□□□□□ -1.31
USP48-202ENST00000374730 KIAA0586Q9BVV6 1533 aa6.86□□□□□ -1.31
USP48-202ENST00000374730 ZNF608Q9ULD9 1512 aaPredicted RBP6.86□□□□□ -1.31
USP48-202ENST00000374730 TCOF1Q13428 1488 aaKnown RBP6.85□□□□□ -1.31
USP48-202ENST00000374730 MAGI1Q96QZ7 1491 aaPredicted RBP6.85□□□□□ -1.31
USP48-202ENST00000374730 GNAT3A8MTJ3 354 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 GFRA2O00451 464 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 TFE3P19532 575 aaPredicted RBP6.85□□□□□ -1.31
USP48-202ENST00000374730 CDK8P49336 464 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 CLCN7P51798 805 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 MAP3K11Q16584 847 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 AOC3Q16853 763 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 TSNAXIP1Q2TAA8 658 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 ZNF792Q3KQV3 632 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 EPRSP07814 1512 aaKnown RBP6.85□□□□□ -1.31
USP48-202ENST00000374730 GRIN2AQ12879 1464 aa6.85□□□□□ -1.31
USP48-202ENST00000374730 AKNAQ7Z591 1439 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 SORBS3O60504 671 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 SLITRK5O94991 958 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 CST3P01034 146 aaPredicted RBP6.84□□□□□ -1.31
USP48-202ENST00000374730 GRK4P32298 578 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 NKG7Q16617 165 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 NKPD1Q17RQ9 610 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 ANGEL2Q5VTE6 544 aaKnown RBP6.84□□□□□ -1.31
USP48-202ENST00000374730 ZNF746Q6NUN9 644 aaPredicted RBP6.84□□□□□ -1.31
USP48-202ENST00000374730 NPM2Q86SE8 214 aaKnown RBP6.84□□□□□ -1.31
USP48-202ENST00000374730 CCDC84Q86UT8 332 aaPredicted RBP6.84□□□□□ -1.31
USP48-202ENST00000374730 PHC3Q8NDX5 983 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 ASB11Q8WXH4 323 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 ASIC4Q96FT7 647 aa6.84□□□□□ -1.31
USP48-202ENST00000374730 HFM1A2PYH4 1435 aa6.84□□□□□ -1.32
USP48-202ENST00000374730 RAPGEF6Q8TEU7 1601 aa6.83□□□□□ -1.32
USP48-202ENST00000374730 DISP1Q96F81 1524 aa6.83□□□□□ -1.32
USP48-202ENST00000374730 ZNF865P0CJ78 1059 aaPredicted RBP6.83□□□□□ -1.32
USP48-202ENST00000374730 RPL6Q02878 288 aaKnown RBP6.83□□□□□ -1.32
USP48-202ENST00000374730 FAM50AQ14320 339 aaKnown RBP6.83□□□□□ -1.32
USP48-202ENST00000374730 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
USP48-202ENST00000374730 COX4I2Q96KJ9 171 aa6.83□□□□□ -1.32
USP48-202ENST00000374730 FAM161BQ96MY7 647 aa6.83□□□□□ -1.32
USP48-202ENST00000374730 MIPEPQ99797 713 aa6.83□□□□□ -1.32
USP48-202ENST00000374730 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
USP48-202ENST00000374730 GOLGA2P5Q9HBQ8 144 aa6.83□□□□□ -1.32
USP48-202ENST00000374730 MRS2Q9HD23 443 aa6.83□□□□□ -1.32
USP48-202ENST00000374730 ERCC6Q03468 1493 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 BIN1O00499 593 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 CENPBP07199 599 aaPredicted RBP6.82□□□□□ -1.32
USP48-202ENST00000374730 CD96P40200 585 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 PDE4BQ07343 736 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 SFRP5Q5T4F7 317 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 LETMD1Q6P1Q0 360 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 ADAM30Q9UKF2 790 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 MIA2Q96PC5 1412 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 CEP170Q5SW79 1584 aa6.82□□□□□ -1.32
USP48-202ENST00000374730 PITPNM2Q9BZ72 1349 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 SYNJ2O15056 1496 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 ADCY10Q96PN6 1610 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 PAPLNO95428 1278 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 LMNB2Q03252 620 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 PRAMEF13Q5VWM6 474 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 SLC23A3Q6PIS1 610 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 MFSD4AQ8N468 514 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 PI4K2BQ8TCG2 481 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 RC3H2Q9HBD1 1191 aaKnown RBP6.81□□□□□ -1.32
USP48-202ENST00000374730 MBNL3Q9NUK0 354 aaKnown RBP6.81□□□□□ -1.32
USP48-202ENST00000374730 VTI1BQ9UEU0 232 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 TPX2Q9ULW0 747 aaKnown RBP6.81□□□□□ -1.32
USP48-202ENST00000374730 TLR6Q9Y2C9 796 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 UACAQ9BZF9 1416 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 CDK13Q14004 1512 aaKnown RBP6.81□□□□□ -1.32
USP48-202ENST00000374730 ITSN2Q9NZM3 1697 aa6.81□□□□□ -1.32
USP48-202ENST00000374730 PGRP06401 933 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
USP48-202ENST00000374730 NAIPQ13075 1403 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 PWP1Q13610 501 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 PTPRKQ15262 1439 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 SLC6A19Q695T7 634 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 ATG4DQ86TL0 474 aaPredicted RBP6.8□□□□□ -1.32
USP48-202ENST00000374730 TMEM87BQ96K49 555 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 RSRP1Q9BUV0 290 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 TJP2Q9UDY2 1190 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 ADAMTS6Q9UKP5 1117 aa6.8□□□□□ -1.32
USP48-202ENST00000374730 DNMT1P26358 1616 aaKnown RBP6.79□□□□□ -1.32
USP48-202ENST00000374730 NUP153P49790 1475 aaKnown RBP6.79□□□□□ -1.32
USP48-202ENST00000374730 NUP160Q12769 1436 aa6.79□□□□□ -1.32
USP48-202ENST00000374730 CILPO75339 1184 aa6.79□□□□□ -1.32
USP48-202ENST00000374730 CYP7A1P22680 504 aa6.79□□□□□ -1.32
USP48-202ENST00000374730 KIR3DL1P43629 444 aa6.79□□□□□ -1.32
USP48-202ENST00000374730 TAGLNQ01995 201 aaKnown RBP6.79□□□□□ -1.32
USP48-202ENST00000374730 IKZF1Q13422 519 aa6.79□□□□□ -1.32
USP48-202ENST00000374730 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
USP48-202ENST00000374730 RHOVQ96L33 236 aa6.79□□□□□ -1.32
USP48-202ENST00000374730 FAM155AB1AL88 458 aaPredicted RBP6.78□□□□□ -1.32
USP48-202ENST00000374730 BPNT1O95861 308 aa6.78□□□□□ -1.32
USP48-202ENST00000374730 CAMK2GQ13555 558 aaPredicted RBP6.78□□□□□ -1.32
USP48-202ENST00000374730 MCATQ8IVS2 390 aaKnown RBP6.78□□□□□ -1.32
USP48-202ENST00000374730 LRRN4CLQ8ND94 238 aa6.78□□□□□ -1.32
USP48-202ENST00000374730 GATAD2BQ8WXI9 593 aa6.78□□□□□ -1.32
USP48-202ENST00000374730 JARID2Q92833 1246 aaPredicted RBP6.78□□□□□ -1.32
USP48-202ENST00000374730 TMEM74Q96NL1 305 aa6.78□□□□□ -1.32
USP48-202ENST00000374730 LMCD1Q9NZU5 365 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms