RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 ORC4O43929 436 aa15.3■□□□□ 0.04
A1CF-204ENST00000373997 FGRP09769 529 aa15.3■□□□□ 0.04
A1CF-204ENST00000373997 CDC27P30260 824 aa15.3■□□□□ 0.04
A1CF-204ENST00000373997 FAM47AQ5JRC9 791 aa15.3■□□□□ 0.04
A1CF-204ENST00000373997 SYNE3Q6ZMZ3 975 aa15.3■□□□□ 0.04
A1CF-204ENST00000373997 KIAA0825Q8IV33 1275 aa15.3■□□□□ 0.04
A1CF-204ENST00000373997 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
A1CF-204ENST00000373997 ROBO3Q96MS0 1386 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 PSDA5PKW4 1024 aaPredicted RBP15.29■□□□□ 0.04
A1CF-204ENST00000373997 SMTNL1A8MU46 457 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 PICALMQ13492 652 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 STRIP1Q5VSL9 837 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 IQCA1Q86XH1 822 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 ZSCAN10Q96SZ4 725 aaPredicted RBP15.29■□□□□ 0.04
A1CF-204ENST00000373997 PAXBP1Q9Y5B6 917 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 COL4A5P29400 1685 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 USP17L3A6NCW0 530 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 USP17L4A6NCW7 530 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 FDPSP14324 419 aaKnown RBP15.29■□□□□ 0.04
A1CF-204ENST00000373997 PLCD1P51178 756 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 GUCY1B3Q02153 619 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 LRMPQ12912 555 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 SEC23AQ15436 765 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 DACT2Q5SW24 774 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 USP17L1Q7RTZ2 530 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 ENAHQ8N8S7 591 aaPredicted RBP15.29■□□□□ 0.04
A1CF-204ENST00000373997 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 MTA3Q9BTC8 594 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 ANO10Q9NW15 660 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 ORC3Q9UBD5 711 aaPredicted RBP15.29■□□□□ 0.04
A1CF-204ENST00000373997 NRBP1Q9UHY1 535 aa15.29■□□□□ 0.04
A1CF-204ENST00000373997 TSPY2A6NKD2 308 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 NMT2O60551 498 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 KINO60870 393 aaKnown RBP15.28■□□□□ 0.04
A1CF-204ENST00000373997 FAM160A1Q05DH4 1040 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 RTKN2Q8IZC4 609 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 ZNF654Q8IZM8 581 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 PDCL2Q8N4E4 241 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 SLC44A5Q8NCS7 719 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 NUP133Q8WUM0 1156 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 ZNF277Q9NRM2 450 aaPredicted RBP15.28■□□□□ 0.04
A1CF-204ENST00000373997 CRKP46108 304 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 IFIT1BQ5T764 474 aaKnown RBP15.28■□□□□ 0.04
A1CF-204ENST00000373997 ENGASEQ8NFI3 743 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 UPF1Q92900 1129 aaKnown RBP eCLIP15.28■□□□□ 0.04
A1CF-204ENST00000373997 PHKBQ93100 1093 aa15.28■□□□□ 0.04
A1CF-204ENST00000373997 YDJCA8MPS7 323 aa15.27■□□□□ 0.04
A1CF-204ENST00000373997 SNW1Q13573 536 aaKnown RBP15.27■□□□□ 0.04
A1CF-204ENST00000373997 CPLX2Q6PUV4 134 aaKnown RBP15.27■□□□□ 0.04
A1CF-204ENST00000373997 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
A1CF-204ENST00000373997 CACTINQ8WUQ7 758 aaKnown RBP15.27■□□□□ 0.04
A1CF-204ENST00000373997 USP28Q96RU2 1077 aa15.27■□□□□ 0.04
A1CF-204ENST00000373997 MKNK2Q9HBH9 465 aa15.27■□□□□ 0.04
A1CF-204ENST00000373997 USP40Q9NVE5 1235 aa15.27■□□□□ 0.04
A1CF-204ENST00000373997 PIM2Q9P1W9 311 aa15.27■□□□□ 0.04
A1CF-204ENST00000373997 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.04
A1CF-204ENST00000373997 BAZ2BQ9UIF8 2168 aaKnown RBP15.27■□□□□ 0.03
A1CF-204ENST00000373997 CDKL5O76039 1030 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 TNNT1P13805 278 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 RBM5P52756 815 aaKnown RBP eCLIP15.26■□□□□ 0.03
A1CF-204ENST00000373997 TGFB2P61812 414 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 RTN1Q16799 776 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 PPP4R3BQ5MIZ7 849 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 HHIPL2Q6UWX4 724 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 C11orf57Q6ZUT1 292 aaPredicted RBP15.26■□□□□ 0.03
A1CF-204ENST00000373997 LARGE2Q8N3Y3 721 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 PSMD1Q99460 953 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 GOLPH3LQ9H4A5 285 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 FAM217BQ9NTX9 383 aaPredicted RBP15.26■□□□□ 0.03
A1CF-204ENST00000373997 SIPA1L1O43166 1804 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 NID2Q14112 1375 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 BECN2A8MW95 431 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 FKBP1AP62942 108 aaKnown RBP15.26■□□□□ 0.03
A1CF-204ENST00000373997 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
A1CF-204ENST00000373997 NAT10Q9H0A0 1025 aaKnown RBP15.26■□□□□ 0.03
A1CF-204ENST00000373997 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
A1CF-204ENST00000373997 A0A1W2PQ27 194 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 A0A1W2PQ64 194 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 A0A1W2PQD8 194 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 TFAP4Q01664 338 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 CEBPZQ03701 1054 aaKnown RBP15.25■□□□□ 0.03
A1CF-204ENST00000373997 CCDC144BQ3MJ40 725 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 OTUD7BQ6GQQ9 843 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 CDC42EP5Q6NZY7 148 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 LRRC8AQ8IWT6 810 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 CEP57L1Q8IYX8 460 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 C8orf76Q96K31 380 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 C16orf45Q96MC5 204 aaPredicted RBP15.25■□□□□ 0.03
A1CF-204ENST00000373997 ARID3AQ99856 593 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 WDHD1O75717 1129 aaPredicted RBP15.25■□□□□ 0.03
A1CF-204ENST00000373997 NTRK3Q16288 839 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 UTP14CQ5TAP6 766 aaKnown RBP15.25■□□□□ 0.03
A1CF-204ENST00000373997 APOBEC3HQ6NTF7 200 aaKnown RBP15.25■□□□□ 0.03
A1CF-204ENST00000373997 FSIP1Q8NA03 581 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 AIFM3Q96NN9 605 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 GJB4Q9NTQ9 266 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 RTEL1Q9NZ71 1219 aa15.25■□□□□ 0.03
A1CF-204ENST00000373997 MYH4Q9Y623 1939 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 ARFGEF1Q9Y6D6 1849 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 RAD17O75943 681 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms