RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 DDB1Q16531 1140 aa19.05■□□□□ 0.64
PCIF1-201ENST00000372409 CAVIN4Q5BKX8 364 aa19.05■□□□□ 0.64
PCIF1-201ENST00000372409 RIOK1Q9BRS2 568 aaKnown RBP19.05■□□□□ 0.64
PCIF1-201ENST00000372409 DESI2Q9BSY9 194 aa19.05■□□□□ 0.64
PCIF1-201ENST00000372409 PHF20Q9BVI0 1012 aa19.05■□□□□ 0.64
PCIF1-201ENST00000372409 AATFQ9NY61 560 aaKnown RBP eCLIP19.05■□□□□ 0.64
PCIF1-201ENST00000372409 ANAPC4Q9UJX5 808 aa19.05■□□□□ 0.64
PCIF1-201ENST00000372409 WNT7AO00755 349 aa19.04■□□□□ 0.64
PCIF1-201ENST00000372409 STX10O60499 249 aa19.04■□□□□ 0.64
PCIF1-201ENST00000372409 NOM1Q5C9Z4 860 aaKnown RBP19.04■□□□□ 0.64
PCIF1-201ENST00000372409 BRMS1Q9HCU9 246 aa19.04■□□□□ 0.64
PCIF1-201ENST00000372409 PPP2R5BQ15173 497 aa19.04■□□□□ 0.64
PCIF1-201ENST00000372409 SMYD4Q8IYR2 804 aaPredicted RBP19.04■□□□□ 0.64
PCIF1-201ENST00000372409 STAMQ92783 540 aa19.04■□□□□ 0.64
PCIF1-201ENST00000372409 BAZ2AQ9UIF9 1905 aaKnown RBP19.04■□□□□ 0.64
PCIF1-201ENST00000372409 PRPF3O43395 683 aaKnown RBP19.03■□□□□ 0.64
PCIF1-201ENST00000372409 H2AFXP16104 143 aaPredicted RBP19.03■□□□□ 0.64
PCIF1-201ENST00000372409 CASQ1P31415 396 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 CLCN6P51797 869 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 CPLX3Q8WVH0 158 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 NOL10Q9BSC4 688 aaKnown RBP19.03■□□□□ 0.64
PCIF1-201ENST00000372409 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 STRCQ7RTU9 1775 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 PLCH1Q4KWH8 1693 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 ERFEQ4G0M1 354 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 BICDL1Q6ZP65 573 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 C3orf67Q6ZVT6 689 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 PAGE5Q96GU1 130 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 SYNRGQ9UMZ2 1314 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 COL4A1P02462 1669 aa19.03■□□□□ 0.64
PCIF1-201ENST00000372409 USP17L12C9JPN9 530 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 USP17L21D6R901 530 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 TEX33O43247 280 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 SLFN14P0C7P3 912 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 ERCC5P28715 1186 aaPredicted RBP19.02■□□□□ 0.64
PCIF1-201ENST00000372409 KARSQ15046 597 aaKnown RBP19.02■□□□□ 0.64
PCIF1-201ENST00000372409 WDR24Q96S15 920 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 ZNF804BA4D1E1 1349 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 PHLPP1O60346 1717 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 CD44P16070 742 aaKnown RBP19.02■□□□□ 0.64
PCIF1-201ENST00000372409 EVX2Q03828 476 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 GABPB1Q06547 395 aaPredicted RBP19.02■□□□□ 0.64
PCIF1-201ENST00000372409 FUT2Q10981 343 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 NR1I3Q14994 352 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 SPATA20Q8TB22 786 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 RBM28Q9NW13 759 aaKnown RBP19.02■□□□□ 0.64
PCIF1-201ENST00000372409 ZNF652Q9Y2D9 606 aa19.02■□□□□ 0.64
PCIF1-201ENST00000372409 COL14A1Q05707 1796 aaKnown RBP19.02■□□□□ 0.64
PCIF1-201ENST00000372409 COL1A1P02452 1464 aaPredicted RBP19.02■□□□□ 0.63
PCIF1-201ENST00000372409 NMT2O60551 498 aa19.02■□□□□ 0.63
PCIF1-201ENST00000372409 ADAMTS2O95450 1211 aa19.02■□□□□ 0.63
PCIF1-201ENST00000372409 GTF2E1P29083 439 aaPredicted RBP19.02■□□□□ 0.63
PCIF1-201ENST00000372409 SRRTQ9BXP5 876 aaKnown RBP19.02■□□□□ 0.63
PCIF1-201ENST00000372409 CICQ96RK0 1608 aaPredicted RBP19.01■□□□□ 0.63
PCIF1-201ENST00000372409 GOLGA6L9A6NEM1 432 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 COBLO75128 1261 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 TROAPQ12815 778 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 MTF1Q14872 753 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 TTC38Q5R3I4 469 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 CTR9Q6PD62 1173 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 BAZ2BQ9UIF8 2168 aaKnown RBP19.01■□□□□ 0.63
PCIF1-201ENST00000372409 AKR1B15C9JRZ8 316 aaPredicted RBP19.01■□□□□ 0.63
PCIF1-201ENST00000372409 UBE4AQ14139 1066 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 BMS1Q14692 1282 aaKnown RBP19.01■□□□□ 0.63
PCIF1-201ENST00000372409 SLC4A8Q2Y0W8 1093 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 FAM47AQ5JRC9 791 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 SPATA1Q5VX52 437 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 PPFIBP1Q86W92 1011 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 FERMT2Q96AC1 680 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 ST7Q9NRC1 585 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 ARGLU1Q9NWB6 273 aaPredicted RBP19.01■□□□□ 0.63
PCIF1-201ENST00000372409 BCL9LQ86UU0 1499 aa19.01■□□□□ 0.63
PCIF1-201ENST00000372409 TAF1P21675 1872 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 A0A1B0GTH6 734 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 CALM1P0DP23 149 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 CALM2P0DP24 149 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 CALM3P0DP25 149 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 PTGDRQ13258 359 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 CTCFLQ8NI51 663 aaPredicted RBP19■□□□□ 0.63
PCIF1-201ENST00000372409 BRIP1Q9BX63 1249 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 SOWAHDA6NJG2 315 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 IGSF22Q8N9C0 903 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 EPC1Q9H2F5 836 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 DUOX1Q9NRD9 1551 aa19■□□□□ 0.63
PCIF1-201ENST00000372409 MYH14Q7Z406 1995 aaKnown RBP18.99■□□□□ 0.63
PCIF1-201ENST00000372409 TADA3O75528 432 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 NLRP5P59047 1200 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 PIK3AP1Q6ZUJ8 805 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 TMTC3Q6ZXV5 915 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 CREBRFQ8IUR6 639 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 ZNF384Q8TF68 577 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 FAM84BQ96KN1 310 aaPredicted RBP18.99■□□□□ 0.63
PCIF1-201ENST00000372409 BLZF1Q9H2G9 400 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 MINPP1Q9UNW1 487 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 KIF20AO95235 890 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 BMP15O95972 392 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 TMCO3Q6UWJ1 677 aa18.99■□□□□ 0.63
PCIF1-201ENST00000372409 SRBD1Q8N5C6 995 aaKnown RBP18.99■□□□□ 0.63
PCIF1-201ENST00000372409 EFCAB8A8MWE9 144 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 RBL2Q08999 1139 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms