RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 PDE4AP27815 886 aa23.95■■□□□ 1.42
TMEM53-205ENST00000372244 SIAH1Q8IUQ4 282 aa23.95■■□□□ 1.42
TMEM53-205ENST00000372244 NACAP1Q9BZK3 213 aa23.95■■□□□ 1.42
TMEM53-205ENST00000372244 MPHOSPH10O00566 681 aaKnown RBP23.94■■□□□ 1.42
TMEM53-205ENST00000372244 GNRH1P01148 92 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 CTGFP29279 349 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 KIF22Q14807 665 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 CCDC129Q6ZRS4 1044 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 SMCR8Q8TEV9 937 aaPredicted RBP23.94■■□□□ 1.42
TMEM53-205ENST00000372244 FAM227BQ96M60 508 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 HTTP42858 3142 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 A0A1W2PRG0 241 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 CCDC85CA6NKD9 419 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 MINDY4BA8MYZ0 360 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 OSBPP22059 807 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 TDO2P48775 406 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 USP14P54578 494 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 MCMDC2Q4G0Z9 681 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 RILPL2Q969X0 211 aa23.94■■□□□ 1.42
TMEM53-205ENST00000372244 GCLCP48506 637 aaPredicted RBP23.93■■□□□ 1.42
TMEM53-205ENST00000372244 TRIM47Q96LD4 638 aa23.93■■□□□ 1.42
TMEM53-205ENST00000372244 ROBO3Q96MS0 1386 aa23.93■■□□□ 1.42
TMEM53-205ENST00000372244 LOC285556D6RIA3 1793 aa23.92■■□□□ 1.42
TMEM53-205ENST00000372244 A0A0D9SFI3 127 aa23.92■■□□□ 1.42
TMEM53-205ENST00000372244 SDSP20132 328 aa23.92■■□□□ 1.42
TMEM53-205ENST00000372244 PSMC4P43686 418 aa23.92■■□□□ 1.42
TMEM53-205ENST00000372244 P2RX7Q99572 595 aaKnown RBP23.92■■□□□ 1.42
TMEM53-205ENST00000372244 RASA1P20936 1047 aa23.91■■□□□ 1.42
TMEM53-205ENST00000372244 ALX1Q15699 326 aa23.91■■□□□ 1.42
TMEM53-205ENST00000372244 ANKRD13CQ8N6S4 541 aa23.91■■□□□ 1.42
TMEM53-205ENST00000372244 FEZ1Q99689 392 aa23.91■■□□□ 1.42
TMEM53-205ENST00000372244 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.91■■□□□ 1.42
TMEM53-205ENST00000372244 NMIQ13287 307 aaPredicted RBP23.9■■□□□ 1.42
TMEM53-205ENST00000372244 ZYXQ15942 572 aaKnown RBP23.9■■□□□ 1.42
TMEM53-205ENST00000372244 VPS53Q5VIR6 699 aa23.9■■□□□ 1.42
TMEM53-205ENST00000372244 NAPBQ9H115 298 aa23.9■■□□□ 1.42
TMEM53-205ENST00000372244 KANSL2Q9H9L4 492 aa23.9■■□□□ 1.42
TMEM53-205ENST00000372244 IRX3P78415 501 aaPredicted RBP23.89■■□□□ 1.42
TMEM53-205ENST00000372244 FAM110CQ1W6H9 321 aa23.89■■□□□ 1.42
TMEM53-205ENST00000372244 MKNK2Q9HBH9 465 aa23.89■■□□□ 1.42
TMEM53-205ENST00000372244 TMX2Q9Y320 296 aa23.89■■□□□ 1.42
TMEM53-205ENST00000372244 USP17L15C9J2P7 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 USP17L13C9JLJ4 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 USP17L11C9JVI0 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 USP17L18D6R9N7 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 USP17L22D6RA61 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 USP17L17D6RBQ6 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 USP17L19D6RCP7 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 USP17L20D6RJB6 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 VCAM1P19320 739 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 PRMT2P55345 433 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 USP17L24Q0WX57 530 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 POTEEQ6S8J3 1075 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 CATSPERGQ6ZRH7 1159 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 ZNF287Q9HBT7 754 aa23.88■■□□□ 1.41
TMEM53-205ENST00000372244 FMNL1O95466 1100 aaPredicted RBP23.87■■□□□ 1.41
TMEM53-205ENST00000372244 HERVK_113P62684 666 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 ICA1Q05084 483 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 PPARAQ07869 468 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 ZNF589Q86UQ0 364 aaPredicted RBP23.87■■□□□ 1.41
TMEM53-205ENST00000372244 STK11IPQ8N1F8 1099 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 MORF4L1Q9UBU8 362 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 SRRDQ9UH36 339 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 CENPFP49454 3210 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 HSPD1P10809 573 aaKnown RBP23.87■■□□□ 1.41
TMEM53-205ENST00000372244 HOXD10P28358 340 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 FCGRTP55899 365 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 KIAA1755Q5JYT7 1200 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 CLEC10AQ8IUN9 316 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 ARHGEF10LQ9HCE6 1279 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 RBPJLQ9UBG7 517 aa23.87■■□□□ 1.41
TMEM53-205ENST00000372244 FGAP02671 866 aa23.86■■□□□ 1.41
TMEM53-205ENST00000372244 EEF2P13639 858 aaKnown RBP23.86■■□□□ 1.41
TMEM53-205ENST00000372244 TTC22Q5TAA0 569 aa23.86■■□□□ 1.41
TMEM53-205ENST00000372244 TXNRD2Q9NNW7 524 aa23.86■■□□□ 1.41
TMEM53-205ENST00000372244 ANAPC4Q9UJX5 808 aa23.86■■□□□ 1.41
TMEM53-205ENST00000372244 PTCH2Q9Y6C5 1203 aa23.86■■□□□ 1.41
TMEM53-205ENST00000372244 PRDM1O75626 825 aa23.85■■□□□ 1.41
TMEM53-205ENST00000372244 GSPT1P15170 499 aaKnown RBP23.85■■□□□ 1.41
TMEM53-205ENST00000372244 ZNF444Q8N0Y2 327 aaPredicted RBP23.85■■□□□ 1.41
TMEM53-205ENST00000372244 ARMC5Q96C12 935 aa23.85■■□□□ 1.41
TMEM53-205ENST00000372244 IGKV6D-41A0A0C4DH26 115 aa23.84■■□□□ 1.41
TMEM53-205ENST00000372244 HIP1O00291 1037 aa23.84■■□□□ 1.41
TMEM53-205ENST00000372244 ECM2O94769 699 aaPredicted RBP23.84■■□□□ 1.41
TMEM53-205ENST00000372244 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
TMEM53-205ENST00000372244 RGS19P49795 217 aa23.84■■□□□ 1.41
TMEM53-205ENST00000372244 PDE4BQ07343 736 aa23.84■■□□□ 1.41
TMEM53-205ENST00000372244 GTF3C2Q8WUA4 911 aaPredicted RBP23.84■■□□□ 1.41
TMEM53-205ENST00000372244 LPAR1Q92633 364 aa23.84■■□□□ 1.41
TMEM53-205ENST00000372244 RPAP3Q9H6T3 665 aaPredicted RBP23.84■■□□□ 1.41
TMEM53-205ENST00000372244 SH2D4AQ9H788 454 aa23.84■■□□□ 1.41
TMEM53-205ENST00000372244 VCPKMTQ9H867 229 aa23.84■■□□□ 1.41
TMEM53-205ENST00000372244 CCDC171Q6TFL3 1326 aa23.84■■□□□ 1.41
TMEM53-205ENST00000372244 FGRP09769 529 aa23.83■■□□□ 1.41
TMEM53-205ENST00000372244 LBX2Q6XYB7 198 aa23.83■■□□□ 1.41
TMEM53-205ENST00000372244 GPRC5AQ8NFJ5 357 aa23.83■■□□□ 1.41
TMEM53-205ENST00000372244 NYAP2Q9P242 653 aa23.83■■□□□ 1.41
TMEM53-205ENST00000372244 MFAP1P55081 439 aaKnown RBP23.82■■□□□ 1.4
TMEM53-205ENST00000372244 Q3C1V9 767 aa23.82■■□□□ 1.4
TMEM53-205ENST00000372244 CWC27Q6UX04 472 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms