RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 FSD2A1L4K1 749 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 ST18O60284 1047 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
COL5A1-202ENST00000371820 ADD2P35612 726 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 SPP2Q13103 211 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 RAB3GAP1Q15042 981 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 UBE3CQ15386 1083 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 TTC22Q5TAA0 569 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
COL5A1-202ENST00000371820 SLAIN1Q8ND83 568 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 SMCR8Q8TEV9 937 aaPredicted RBP12.32□□□□□ -0.44
COL5A1-202ENST00000371820 WDR18Q9BV38 432 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 TMOD4Q9NZQ9 345 aa12.32□□□□□ -0.44
COL5A1-202ENST00000371820 MYH7P12883 1935 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 C19orf81C9J6K1 198 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 ERC2O15083 957 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 SMARCA5O60264 1052 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-202ENST00000371820 GJB1P08034 283 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 CCL5P13501 91 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 GJA8P48165 433 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 SH3D19Q5HYK7 790 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 ANP32BQ92688 251 aaKnown RBP12.31□□□□□ -0.44
COL5A1-202ENST00000371820 DNAJC18Q9H819 358 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 ATP8A2Q9NTI2 1148 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 ZBTB21Q9ULJ3 1066 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 GABRQQ9UN88 632 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 TTC41PQ6P2S7 1318 aa12.31□□□□□ -0.44
COL5A1-202ENST00000371820 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
COL5A1-202ENST00000371820 USP17L10C9JJH3 530 aa12.3□□□□□ -0.44
COL5A1-202ENST00000371820 MCCP23508 829 aa12.3□□□□□ -0.44
COL5A1-202ENST00000371820 FXR1P51114 621 aaKnown RBP eCLIP12.3□□□□□ -0.44
COL5A1-202ENST00000371820 BACE1P56817 501 aa12.3□□□□□ -0.44
COL5A1-202ENST00000371820 UBXN2AP68543 259 aa12.3□□□□□ -0.44
COL5A1-202ENST00000371820 UBE2Q1Q7Z7E8 422 aa12.3□□□□□ -0.44
COL5A1-202ENST00000371820 EDC3Q96F86 508 aaKnown RBP12.3□□□□□ -0.44
COL5A1-202ENST00000371820 RNF208Q9H0X6 261 aa12.3□□□□□ -0.44
COL5A1-202ENST00000371820 CABP5Q9NP86 173 aa12.3□□□□□ -0.44
COL5A1-202ENST00000371820 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
COL5A1-202ENST00000371820 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
COL5A1-202ENST00000371820 H0YGN5 161 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 TNPO2O14787 897 aaKnown RBP12.29□□□□□ -0.44
COL5A1-202ENST00000371820 MBD4O95243 580 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 ZFYP08048 801 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-202ENST00000371820 GCLCP48506 637 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-202ENST00000371820 FLT3LGP49771 235 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 HMGCS2P54868 508 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 IRF5Q13568 498 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 RRP1BQ14684 758 aaKnown RBP12.29□□□□□ -0.44
COL5A1-202ENST00000371820 FAM110CQ1W6H9 321 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 CERKLQ49MI3 558 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-202ENST00000371820 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 TATDN1Q6P1N9 297 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 LCORLQ8N3X6 602 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 KBTBD3Q8NAB2 608 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 DCP1AQ9NPI6 582 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-202ENST00000371820 BIN2Q9UBW5 565 aaPredicted RBP12.29□□□□□ -0.44
COL5A1-202ENST00000371820 SWAP70Q9UH65 585 aa12.29□□□□□ -0.44
COL5A1-202ENST00000371820 ADCY3O60266 1144 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 GLRX3O76003 335 aaKnown RBP12.28□□□□□ -0.44
COL5A1-202ENST00000371820 GDF11O95390 407 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 USP14P54578 494 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 MTMR2Q13614 643 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 USP17L2Q6R6M4 530 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 ANKRD13CQ8N6S4 541 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 PXYLP1Q8TE99 480 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 U2AF1L4Q8WU68 220 aaKnown RBP12.28□□□□□ -0.44
COL5A1-202ENST00000371820 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 FEZ1Q99689 392 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 USP26Q9BXU7 913 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 ARMT1Q9H993 441 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 TRIOBPQ9H2D6 2365 aa12.28□□□□□ -0.44
COL5A1-202ENST00000371820 GH2P01242 217 aa12.27□□□□□ -0.45
COL5A1-202ENST00000371820 INHAP05111 366 aa12.27□□□□□ -0.45
COL5A1-202ENST00000371820 ELNP15502 786 aa12.27□□□□□ -0.45
COL5A1-202ENST00000371820 PLCD1P51178 756 aa12.27□□□□□ -0.45
COL5A1-202ENST00000371820 IRX3P78415 501 aaPredicted RBP12.27□□□□□ -0.45
COL5A1-202ENST00000371820 GTF3C2Q8WUA4 911 aaPredicted RBP12.27□□□□□ -0.45
COL5A1-202ENST00000371820 APPBP2Q92624 585 aa12.27□□□□□ -0.45
COL5A1-202ENST00000371820 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.45
COL5A1-202ENST00000371820 FARP2O94887 1054 aaPredicted RBP12.26□□□□□ -0.45
COL5A1-202ENST00000371820 SGPL1O95470 568 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 MX1P20591 662 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 HOXA7P31268 230 aaPredicted RBP12.26□□□□□ -0.45
COL5A1-202ENST00000371820 ANAPC15P60006 121 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 GABPAQ06546 454 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 DPF3Q92784 378 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 TNPO1Q92973 898 aaKnown RBP12.26□□□□□ -0.45
COL5A1-202ENST00000371820 COA7Q96BR5 231 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 HTATIP2Q9BUP3 242 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
COL5A1-202ENST00000371820 SLC4A4Q9Y6R1 1079 aa12.26□□□□□ -0.45
COL5A1-202ENST00000371820 DOCK3Q8IZD9 2030 aa12.25□□□□□ -0.45
COL5A1-202ENST00000371820 MPHOSPH10O00566 681 aaKnown RBP12.25□□□□□ -0.45
COL5A1-202ENST00000371820 RNF113AO15541 343 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms