RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 HYOU1Q9Y4L1 999 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 UIMC1Q96RL1 719 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 ETF1P62495 437 aaKnown RBP16.8■□□□□ 0.28
COL5A1-201ENST00000371817 MRPS15P82914 257 aaKnown RBP16.8■□□□□ 0.28
COL5A1-201ENST00000371817 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 GNPTABQ3T906 1256 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 IFT122Q9HBG6 1241 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 MUM1L1Q5H9M0 696 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 SH2D4AQ9H788 454 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 RWDD2BP57060 319 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 KIFC3Q9BVG8 833 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 NFE2L3Q9Y4A8 694 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 KCNK3O14649 394 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 POLD1P28340 1107 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 MIS12Q9H081 205 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 PIK3R4Q99570 1358 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 CREB3L3Q68CJ9 461 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 SUFUQ9UMX1 484 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 AKNAD1Q5T1N1 836 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 ADKP55263 362 aaKnown RBP16.79■□□□□ 0.28
COL5A1-201ENST00000371817 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 CAPRIN2Q6IMN6 1127 aaKnown RBP16.79■□□□□ 0.28
COL5A1-201ENST00000371817 TYW1BQ6NUM6 668 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 GNGT2O14610 69 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 KLHL30Q0D2K2 578 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 POSTNQ15063 836 aa16.79■□□□□ 0.28
COL5A1-201ENST00000371817 GABPAQ06546 454 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 DCUN1D2Q6PH85 259 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 LLPHQ9BRT6 129 aaKnown RBP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 XPO4Q9C0E2 1151 aaKnown RBP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 PDE4DQ08499 809 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 SIRT1Q96EB6 747 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 HIBCHQ6NVY1 386 aaPredicted RBP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 PACSIN2Q9UNF0 486 aaPredicted RBP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 PDHA1P08559 390 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 TCP1P17987 556 aaKnown RBP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 IL1RL1Q01638 556 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 CDR2Q01850 454 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 FNBP1Q96RU3 617 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 C6orf118Q5T5N4 469 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 DYDC2Q96IM9 177 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 MAP3K2Q9Y2U5 619 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 PPP2R2CQ9Y2T4 447 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 TSC22D4Q9Y3Q8 395 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 ATP6V1E1P36543 226 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL5A1-201ENST00000371817 PCDHB15Q9Y5E8 787 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
COL5A1-201ENST00000371817 SNX1Q13596 522 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 ZNF280CQ8ND82 737 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 OLFM3Q96PB7 478 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 RTEL1-TNFRSF6BF6WH68 1400 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 POTEB3A0JP26 581 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 ZRANB2O95218 330 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL5A1-201ENST00000371817 ADCY8P40145 1251 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 POTEBQ6S5H4 581 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 RHPN1Q8TCX5 695 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 TTC41PQ6P2S7 1318 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 OGFOD1Q8N543 542 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 EEF1GP26641 437 aaKnown RBP16.77■□□□□ 0.28
COL5A1-201ENST00000371817 ARHGAP18Q8N392 663 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 FGD4Q96M96 766 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 SERPINI1Q99574 410 aa16.77■□□□□ 0.28
COL5A1-201ENST00000371817 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL5A1-201ENST00000371817 IFNAR2P48551 515 aa16.77■□□□□ 0.27
COL5A1-201ENST00000371817 ANO1Q5XXA6 986 aa16.77■□□□□ 0.27
COL5A1-201ENST00000371817 INTUQ9ULD6 942 aa16.77■□□□□ 0.27
COL5A1-201ENST00000371817 MAPK8IP1Q9UQF2 711 aa16.77■□□□□ 0.27
COL5A1-201ENST00000371817 CCDC151A5D8V7 595 aa16.77■□□□□ 0.27
COL5A1-201ENST00000371817 TRIM42Q8IWZ5 723 aa16.77■□□□□ 0.27
COL5A1-201ENST00000371817 ARHGEF18Q6ZSZ5 1173 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 FBXO18Q8NFZ0 1043 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 FGFR1OP2Q9NVK5 253 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 EIF3CLB5ME19 914 aaKnown RBP16.76■□□□□ 0.27
COL5A1-201ENST00000371817 CHGBP05060 677 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 LDHCP07864 332 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 LMNB1P20700 586 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 EIF3CQ99613 913 aaKnown RBP16.76■□□□□ 0.27
COL5A1-201ENST00000371817 ESYT2A0FGR8 921 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 ARHGAP10A1A4S6 786 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 MCF2LO15068 1137 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 HSPA8P11142 646 aaKnown RBP16.76■□□□□ 0.27
COL5A1-201ENST00000371817 ASPHQ12797 758 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 HELLSQ9NRZ9 838 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 EPHB4P54760 987 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 GUCY2DQ02846 1103 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 TERF2Q15554 542 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 TEX2Q8IWB9 1127 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
COL5A1-201ENST00000371817 RASSF10A6NK89 507 aa16.76■□□□□ 0.27
COL5A1-201ENST00000371817 CUTAO60888 179 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms