RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 LRRC47Q8N1G4 583 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 OSBPL3Q9H4L5 887 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 VPS18Q9P253 973 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 LMO7Q8WWI1 1683 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 CAMTA1Q9Y6Y1 1673 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 SOS2Q07890 1332 aaPredicted RBP10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 PARP1P09874 1014 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 PPP2R3AQ06190 1150 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 POSTNQ15063 836 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 VPS36Q86VN1 386 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 CSGALNACT2Q8N6G5 542 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 NSUN7Q8NE18 718 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 CACTINQ8WUQ7 758 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 BICD1Q96G01 975 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 TCHPQ9BT92 498 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 BABAM1Q9NWV8 329 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 MRVI1Q9Y6F6 885 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 CTAGE9A4FU28 777 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 AKR1B15C9JRZ8 316 aaPredicted RBP10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 KIF5AQ12840 1032 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 LLGL1Q15334 1064 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 KIAA0825Q8IV33 1275 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 FBXO18Q8NFZ0 1043 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 PIGBQ92521 554 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 PRDM4Q9UKN5 801 aa10.26□□□□□ -0.77
SMARCA1-202ENST00000371122 AOX1Q06278 1338 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 NFAT5O94916 1531 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 SPDYE3A6NKU9 549 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 CALML3P27482 149 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 ARID4AP29374 1257 aaPredicted RBP10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 ZBTB38Q8NAP3 1195 aaPredicted RBP10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 FANCBQ8NB91 859 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 DSCC1Q9BVC3 393 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 TRIM31Q9BZY9 425 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 POLD4Q9HCU8 107 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 SRP68Q9UHB9 627 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 DENND2AQ9ULE3 1009 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 USP31Q70CQ4 1352 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 LOC102724428A0A0B4J2F2 783 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 ATP1A3P13637 1013 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 GNAQP50148 359 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 SIK1P57059 783 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 HS1BP3Q53T59 392 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 IQCEQ6IPM2 695 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 NOC4LQ9BVI4 516 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 MYO6Q9UM54 1294 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 PFKFB2O60825 505 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 CYLC1P35663 651 aaPredicted RBP10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 TNIP1Q15025 636 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 NECTIN1Q15223 517 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 MFSD14BQ5SR56 506 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 IPO4Q8TEX9 1081 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 ALS2CR12Q96Q35 445 aa10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 LLPHQ9BRT6 129 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-202ENST00000371122 A0A0G2JLW4 131 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 FGFR1OPO95684 399 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 GSTO1P78417 241 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 CUL4AQ13619 759 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 WWC2Q6AWC2 1192 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 GBP3Q9H0R5 595 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 RMND1Q9NWS8 449 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 CAPN2P17655 700 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 RDXP35241 583 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 CRKLP46109 303 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 SCARF1Q14162 830 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 ADALQ6DHV7 355 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 LCORLQ8N3X6 602 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 ZSWIM5Q9P217 1185 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.24□□□□□ -0.772e-6■□□□□ 9.7
SMARCA1-202ENST00000371122 ADCY9O60503 1353 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 TECP42680 631 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 HERC4Q5GLZ8 1057 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 APOA5Q6Q788 366 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 BRINP3Q76B58 766 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 DYNLL2Q96FJ2 89 aa10.24□□□□□ -0.77
SMARCA1-202ENST00000371122 OVOS2A0A0J9YW53 1432 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 OVOS2Q6IE36 1432 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 WDHD1O75717 1129 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 NLRP12P59046 1061 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 ATRIPQ8WXE1 791 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 PIH1D3Q9NQM4 214 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 VIRMAQ69YN4 1812 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 CFBP00751 764 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 PTGDRQ13258 359 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 ZMYM1Q5SVZ6 1142 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 CCDC25Q86WR0 208 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 NOSTRINQ8IVI9 506 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 SPICE1Q8N0Z3 855 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 SYNRGQ9UMZ2 1314 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 RTL9Q8NET4 1388 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 CACNB1Q02641 598 aaPredicted RBP10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 SPAG1Q07617 926 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 SNX29Q8TEQ0 813 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 CTAGE1Q96RT6 745 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms