RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 LRRC31Q6UY01 552 aa19.76■□□□□ 0.75
CHTOP-203ENST00000368690 TMTC1Q8IUR5 882 aa19.76■□□□□ 0.75
CHTOP-203ENST00000368690 PPFIA4O75335 1185 aa19.75■□□□□ 0.75
CHTOP-203ENST00000368690 PRR29P0C7W0 189 aa19.75■□□□□ 0.75
CHTOP-203ENST00000368690 HSP90AA4PQ58FG1 418 aa19.75■□□□□ 0.75
CHTOP-203ENST00000368690 SLC9C2Q5TAH2 1124 aa19.75■□□□□ 0.75
CHTOP-203ENST00000368690 SGMS1Q86VZ5 419 aa19.75■□□□□ 0.75
CHTOP-203ENST00000368690 TRMT44Q8IYL2 757 aaKnown RBP19.75■□□□□ 0.75
CHTOP-203ENST00000368690 SERTAD1Q9UHV2 236 aa19.75■□□□□ 0.75
CHTOP-203ENST00000368690 WWC3Q9ULE0 1092 aa19.75■□□□□ 0.75
CHTOP-203ENST00000368690 NID2Q14112 1375 aa19.75■□□□□ 0.75
CHTOP-203ENST00000368690 ACTN4O43707 911 aaKnown RBP19.74■□□□□ 0.75
CHTOP-203ENST00000368690 FKBP4Q02790 459 aaKnown RBP eCLIP19.74■□□□□ 0.75
CHTOP-203ENST00000368690 FILIP1LQ4L180 1135 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 RILPL1Q5EBL4 403 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 CDKAL1Q5VV42 579 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 SLC35F6Q8N357 371 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 CWC25Q9NXE8 425 aaPredicted RBP19.74■□□□□ 0.75
CHTOP-203ENST00000368690 CEP126Q9P2H0 1117 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 NUP188Q5SRE5 1749 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 POLR2DO15514 142 aaKnown RBP19.74■□□□□ 0.75
CHTOP-203ENST00000368690 GPAA1O43292 621 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 ZBTB43O43298 467 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 ONECUT3O60422 494 aaPredicted RBP19.74■□□□□ 0.75
CHTOP-203ENST00000368690 LRRC24Q50LG9 513 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 CCDC102AQ96A19 550 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 FAM107BQ9H098 131 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 UBN2Q6ZU65 1347 aa19.74■□□□□ 0.75
CHTOP-203ENST00000368690 TEX33O43247 280 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 GTF2A1P52655 376 aaPredicted RBP19.73■□□□□ 0.75
CHTOP-203ENST00000368690 KCNQ4P56696 695 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 AMPD2Q01433 879 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 EFCAB13Q8IY85 973 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 NBPF3Q9H094 633 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 PUS7LQ9H0K6 701 aaKnown RBP19.73■□□□□ 0.75
CHTOP-203ENST00000368690 FOXP1Q9H334 677 aaPredicted RBP19.73■□□□□ 0.75
CHTOP-203ENST00000368690 TBC1D2BQ9UPU7 963 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 SRPRBQ9Y5M8 271 aaKnown RBP19.73■□□□□ 0.75
CHTOP-203ENST00000368690 ITPK1Q13572 414 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 SAFBQ15424 915 aaKnown RBP eCLIP19.73■□□□□ 0.755e-7■■□□□ 12
CHTOP-203ENST00000368690 MAP9Q49MG5 647 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 GEMIN8Q9NWZ8 242 aaKnown RBP19.73■□□□□ 0.75
CHTOP-203ENST00000368690 CEP131Q9UPN4 1083 aa19.73■□□□□ 0.75
CHTOP-203ENST00000368690 MYO5AQ9Y4I1 1855 aaKnown RBP19.72■□□□□ 0.75
CHTOP-203ENST00000368690 RANBP6O60518 1105 aaKnown RBP19.72■□□□□ 0.75
CHTOP-203ENST00000368690 FMNL1O95466 1100 aaPredicted RBP19.72■□□□□ 0.75
CHTOP-203ENST00000368690 RHOXF2BP0C7M4 288 aa19.72■□□□□ 0.75
CHTOP-203ENST00000368690 TOB1P50616 345 aaPredicted RBP19.72■□□□□ 0.75
CHTOP-203ENST00000368690 SSRP1Q08945 709 aaKnown RBP19.72■□□□□ 0.75
CHTOP-203ENST00000368690 CUL4BQ13620 913 aa19.72■□□□□ 0.75
CHTOP-203ENST00000368690 CYB5R4Q7L1T6 521 aa19.72■□□□□ 0.75
CHTOP-203ENST00000368690 PHKBQ93100 1093 aa19.72■□□□□ 0.75
CHTOP-203ENST00000368690 RHOXF2Q9BQY4 288 aa19.72■□□□□ 0.75
CHTOP-203ENST00000368690 SUGCTQ9HAC7 445 aa19.72■□□□□ 0.75
CHTOP-203ENST00000368690 FAM217BQ9NTX9 383 aaPredicted RBP19.72■□□□□ 0.75
CHTOP-203ENST00000368690 JRKLQ9Y4A0 524 aa19.72■□□□□ 0.75
CHTOP-203ENST00000368690 MMP1P03956 469 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 LIFRP42702 1097 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 CRKLP46109 303 aaKnown RBP19.71■□□□□ 0.75
CHTOP-203ENST00000368690 TRIM14Q14142 442 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 FOXR1Q6PIV2 292 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 PACS2Q86VP3 889 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 CCDC148Q8NFR7 591 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 IGDCC4Q8TDY8 1250 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.71■□□□□ 0.75
CHTOP-203ENST00000368690 FAM204AQ9H8W3 233 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 SYNRGQ9UMZ2 1314 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 LRRIQ3A6PVS8 624 aaPredicted RBP19.71■□□□□ 0.75
CHTOP-203ENST00000368690 GUCY2CP25092 1073 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 ZNF827Q17R98 1081 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 ZNF772Q68DY9 489 aaPredicted RBP19.71■□□□□ 0.75
CHTOP-203ENST00000368690 AFAP1L1Q8TED9 768 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 CCDC87Q9NVE4 849 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 MYO6Q9UM54 1294 aa19.71■□□□□ 0.75
CHTOP-203ENST00000368690 GOLGA8AA7E2F4 631 aa19.7■□□□□ 0.74
CHTOP-203ENST00000368690 PRPF6O94906 941 aaKnown RBP19.7■□□□□ 0.74
CHTOP-203ENST00000368690 IFNAR1P17181 557 aa19.7■□□□□ 0.74
CHTOP-203ENST00000368690 ARHGAP25P42331 645 aa19.7■□□□□ 0.74
CHTOP-203ENST00000368690 XAGE2Q96GT9 111 aa19.7■□□□□ 0.74
CHTOP-203ENST00000368690 TARSL2A2RTX5 802 aaKnown RBP19.7■□□□□ 0.74
CHTOP-203ENST00000368690 GYPCP04921 128 aa19.7■□□□□ 0.74
CHTOP-203ENST00000368690 CYP26C1Q6V0L0 522 aa19.7■□□□□ 0.74
CHTOP-203ENST00000368690 TBC1D10CQ8IV04 446 aa19.7■□□□□ 0.74
CHTOP-203ENST00000368690 SUGP1Q8IWZ8 645 aaKnown RBP19.7■□□□□ 0.74
CHTOP-203ENST00000368690 A0A0U1RQJ8 604 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 RNF40O75150 1001 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 CASP14P31944 242 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 IL6STP40189 918 aaPredicted RBP19.69■□□□□ 0.74
CHTOP-203ENST00000368690 EIF5P55010 431 aaKnown RBP19.69■□□□□ 0.74
CHTOP-203ENST00000368690 DNAJC21Q5F1R6 531 aaKnown RBP19.69■□□□□ 0.74
CHTOP-203ENST00000368690 SPECC1Q5M775 1068 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 WWC2Q6AWC2 1192 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 MICU3Q86XE3 530 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 ATRIPQ8WXE1 791 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 RPGRIP1Q96KN7 1286 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 GSDMAQ96QA5 445 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 LY9Q9HBG7 655 aa19.69■□□□□ 0.74
CHTOP-203ENST00000368690 LRRC10BA6NIK2 292 aa19.68■□□□□ 0.74
CHTOP-203ENST00000368690 USP14P54578 494 aa19.68■□□□□ 0.74
CHTOP-203ENST00000368690 SH3RF1Q7Z6J0 888 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms